Miyakogusa Predicted Gene
- Lj3g3v2296570.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2296570.2 tr|Q5QMW2|Q5QMW2_ORYSJ BZIP protein-like OS=Oryza
sativa subsp. japonica GN=B1080D07.8 PE=4 SV=1,43.75,5e-18,seg,NULL;
coiled-coil,NULL; DUF632,Domain of unknown function DUF632;
DUF630,Domain of unknown funct,CUFF.43754.2
(1833 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO012923 weakly similar to UniRef100_A7P7D2 Cluster: Ch... 700 0.0
gnl|LJGI|TC75530 similar to UniRef100_A7P7D2 Cluster: Chromosome... 133 4e-30
gnl|LJGI|FS358624 weakly similar to UniRef100_A7P7D2 Cluster: Ch... 96 9e-19
>gnl|LJGI|GO012923 weakly similar to UniRef100_A7P7D2 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (12%)
Length = 617
Score = 700 bits (353), Expect = 0.0
Identities = 363/365 (99%), Gaps = 1/365 (0%)
Strand = Plus / Plus
Query: 1322 tagaactgaatcttgtcctcattgagagtaatgatatgggggaaaagctttcttcatcac 1381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tagaactgaatcttgtcctcattgagagtaatgatatgggggaaaagctttcttcatcac 313
Query: 1382 caaatgttaaaagccctcccatacaaatcattcttcatgcttggcatgatcatctagaga 1441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caaatgttaaaagccctcccatacaaatcattcttcatgcttggcatgatcatctagaga 373
Query: 1442 aacttcctgaagagcttgctaggacagccatagccaactttgctgctgccatagatacta 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 aacttcctgaagagcttgctaggacagccatagccaactttgctgctgccatagatacta 433
Query: 1502 ttctccacgagcaagaagaagaaatggttataaagagaaagtgtgaggagacaagaaagg 1561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttctccacgagcaagaagaagaaatggttataaagagaaagtgtgaggagacaagaaagg 493
Query: 1562 aatatgcacgcaaaagtaggcaatttaacgagtgggagtacaagtataatcaaaagaaaa 1621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 aatatgcacgcaaaagtaggcaatttaacgagtgggagtacaagtataatcaaaagaaaa 553
Query: 1622 gaccaggtgagttaggtccagatcaggcagaaaataataatgattctgatgagattgtta 1681
|||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 554 gaccaggtgagtta-gtccagatcacgcagaaaataataatgattctgatgagattgtta 612
Query: 1682 gagag 1686
|||||
Sbjct: 613 gagag 617
>gnl|LJGI|TC75530 similar to UniRef100_A7P7D2 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 766
Score = 133 bits (67), Expect = 4e-30
Identities = 142/167 (85%)
Strand = Plus / Plus
Query: 1 atgggttgctcccaatcgaaaatagagaaggaggaagcagtggcgcgctgcaaagaccgc 60
||||||||| |||||| || || ||||| |||||||| |||||||| |||||||| |||
Sbjct: 67 atgggttgcaaccaatccaagatcgagaacgaggaagcggtggcgcgatgcaaagaacgc 126
Query: 61 caccacttcatgaaggaggcggtttccgcccgtaacgccttcgccgccgcacactcttcc 120
| | | ||||||||| || |||||| | || ||||||||||||||||||||||| |||
Sbjct: 127 aagcgttacatgaaggaagctgtttccactcgcaacgccttcgccgccgcacactcctcc 186
Query: 121 tacgccacctacctcaacaacaccggcgccgccctcactgacttcgc 167
||| |||||| |||||| |||||||||||||||||| |||||||||
Sbjct: 187 tacaccacctccctcaaaaacaccggcgccgccctcggtgacttcgc 233
>gnl|LJGI|FS358624 weakly similar to UniRef100_A7P7D2 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (17%)
Length = 647
Score = 95.6 bits (48), Expect = 9e-19
Identities = 117/140 (83%)
Strand = Plus / Minus
Query: 1423 tggcatgatcatctagagaaacttcctgaagagcttgctaggacagccatagccaacttt 1482
|||||||| | |||||||||||||||||| ||||| ||||||||||| |||| ||||||
Sbjct: 642 tggcatgaccgtctagagaaacttcctgatgagctagctaggacagctatagggaacttt 583
Query: 1483 gctgctgccatagatactattctccacgagcaagaagaagaaatggttataaagagaaag 1542
||||||| || ||||| ||| |||| ||||||| |||||||||| | ||||||||
Sbjct: 582 gctgctgtgatggatacaattttccatcagcaagatgaagaaatgggttggaagagaaaa 523
Query: 1543 tgtgaggagacaagaaagga 1562
|| ||||| ||| |||||||
Sbjct: 522 tgcgaggatacacgaaagga 503
Score = 58.0 bits (29), Expect = 2e-07
Identities = 95/117 (81%)
Strand = Plus / Minus
Query: 1713 gaagaggttggatgaggaggaagaagattatgagaggcagtgcctacatgtgaggcaaaa 1772
|||||||||||| ||||||||||| |||| || || ||||| || |||||||||||
Sbjct: 352 gaagaggttggaacaggaggaagaatcctatgcaagtcactgcctccaagtgaggcaaaa 293
Query: 1773 atctttgaggagtctccaaaatcacttgccaaagctctttaaggctatgtcagattt 1829
||||||| ||||| |||||| | |||| ||||||||| ||| |||||||||||
Sbjct: 292 atctttggcaagtcttaaaaatcgcatgcccgagctctttagggcaatgtcagattt 236