Miyakogusa Predicted Gene
- Lj3g3v2284460.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2284460.1 tr|G7II35|G7II35_MEDTR Solute carrier family 25
(Mitochondrial carrier ornithine transporter)
member,27.15,0.000000000000002,Mitochondrial carrier,Mitochondrial
carrier domain; Mito_carr,Mitochondrial substrate/solute
carrier,NODE_55288_length_1385_cov_24.289530.path1.1
(915 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80919 107 1e-22
gnl|LJGI|FS349095 similar to UniRef100_Q1QB33 Cluster: UPF0059 m... 103 2e-21
gnl|LJGI|BP073353 weakly similar to UniRef100_A7P7B8 Cluster: Ch... 64 2e-09
>gnl|LJGI|TC80919
Length = 335
Score = 107 bits (54), Expect = 1e-22
Identities = 105/122 (86%)
Strand = Plus / Plus
Query: 248 tccaaacttatgcagttctctcaagggcatttgactcatctgtttctgctaaagaccctc 307
||||||| |||||||||||||||||||| ||||||||||||||||| | |||||||||||
Sbjct: 92 tccaaacatatgcagttctctcaagggcctttgactcatctgtttcagttaaagaccctc 151
Query: 308 cttcctacaagggtgttgcattaggaggaatcggtaccggggccatccaaagcttatttc 367
||| ||||| ||||||| ||||||||| | ||||| ||||| || |||| | |||||
Sbjct: 152 attcttacaatggtgttgacttaggaggagttcgtaccagggccttctaaagttgatttc 211
Query: 368 tt 369
||
Sbjct: 212 tt 213
>gnl|LJGI|FS349095 similar to UniRef100_Q1QB33 Cluster: UPF0059 membrane protein
Pcryo_1339; n=1; Psychrobacter cryohalolentis K5|Rep:
UPF0059 membrane protein Pcryo_1339 - Psychrobacter
cryohalolentis (strain K5), partial (9%)
Length = 614
Score = 103 bits (52), Expect = 2e-21
Identities = 109/128 (85%)
Strand = Plus / Minus
Query: 248 tccaaacttatgcagttctctcaagggcatttgactcatctgtttctgctaaagaccctc 307
||||||| |||||||||||||| ||||| ||||||||||||||||| | |||||||||||
Sbjct: 541 tccaaacatatgcagttctctccagggcctttgactcatctgtttcagttaaagaccctc 482
Query: 308 cttcctacaagggtgttgcattaggaggaatcggtaccggggccatccaaagcttatttc 367
||||||| | ||||||| ||||||||| | |||| ||||| || |||| |||||||
Sbjct: 481 attcctaccatggtgttgacttaggaggagttcgtactagggccttctaaagtttatttc 422
Query: 368 tttctccc 375
||| ||||
Sbjct: 421 tttttccc 414
Score = 75.8 bits (38), Expect = 4e-13
Identities = 101/122 (82%)
Strand = Plus / Minus
Query: 499 ggactcggcatcaccgtgatgagggatgttcctgctcatggattgtacttctggacatat 558
||||| |||||||| |||||||||||||| ||| |||||| | ||||| |||||||||
Sbjct: 294 ggactgggcatcactgtgatgagggatgtgccttttcatggttcatacttttggacatat 235
Query: 559 gaatacatgagagaactgcttcatccaggttgcagaaacggcgctcaagaaaatttgaat 618
|||||| ||||||| | || |||||| |||| ||||| |||| | |||||| | |||||
Sbjct: 234 gaatacttgagagagcatctccatccatgttgtagaaaaggcggttaagaaagtctgaat 175
Query: 619 ac 620
||
Sbjct: 174 ac 173
>gnl|LJGI|BP073353 weakly similar to UniRef100_A7P7B8 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 412
Score = 63.9 bits (32), Expect = 2e-09
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 258 tgcagttctctcaagggcatttgactcatctgtttctgctaaagaccctccttcctacaa 317
||||||| |||||||||| | ||||||||||||||| | ||||||||||| ||| ||| |
Sbjct: 166 tgcagttttctcaagggcctgtgactcatctgtttcagttaaagaccctcattcttacta 107
Query: 318 gggtgttg 325
|||||||
Sbjct: 106 tggtgttg 99