Miyakogusa Predicted Gene

Lj3g3v2248290.2

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2248290.2 Non Chatacterized Hit- tr|K4DF87|K4DF87_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,53.92,3e-19,seg,NULL,CUFF.43750.2
         (297 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC66840 similar to UniRef100_A7P7F4 Cluster: Chromosome...   242   1e-63
gnl|LJGI|TC64956 similar to UniRef100_A7P7F4 Cluster: Chromosome...    98   4e-20
gnl|LJGI|BP042217 UniRef100_Q1D0Y8 Cluster: Channel protein, hem...    68   3e-11

>gnl|LJGI|TC66840 similar to UniRef100_A7P7F4 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (12%)
          Length = 668

 Score =  242 bits (122), Expect = 1e-63
 Identities = 125/126 (99%)
 Strand = Plus / Plus

                                                                       
Query: 172 cataatgatgttaataaagctaacaatgaattgaagccaccacagaaatctgagcttgta 231
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2   cataatgatgttaataaagctaacaatgagttgaagccaccacagaaatctgagcttgta 61

                                                                       
Query: 232 agtgatgagtatggacaacggcagaataagcctcgaagatactcagagatgaactttggt 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62  agtgatgagtatggacaacggcagaataagcctcgaagatactcagagatgaactttggt 121

                 
Query: 292 cagtaa 297
           ||||||
Sbjct: 122 cagtaa 127


>gnl|LJGI|TC64956 similar to UniRef100_A7P7F4 Cluster: Chromosome chr9 scaffold_7,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr9 scaffold_7, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (62%)
          Length = 1051

 Score = 97.6 bits (49), Expect = 4e-20
 Identities = 91/105 (86%)
 Strand = Plus / Plus

                                                                       
Query: 186 taaagctaacaatgaattgaagccaccacagaaatctgagcttgtaagtgatgagtatgg 245
           ||||||||| ||||||| | ||||||| |||| | |||||| ||||| |||||||| |||
Sbjct: 370 taaagctaataatgaatgggagccacctcagagacctgagcctgtaaatgatgagtttgg 429

                                                        
Query: 246 acaacggcagaataagcctcgaagatactcagagatgaactttgg 290
            || ||||| |||||||| || |||||||||||||||||||||||
Sbjct: 430 tcagcggcaaaataagccccgcagatactcagagatgaactttgg 474


>gnl|LJGI|BP042217 UniRef100_Q1D0Y8 Cluster: Channel protein, hemolysin III family;
           n=1; Myxococcus xanthus DK 1622|Rep: Channel protein,
           hemolysin III family - Myxococcus xanthus (strain DK
           1622), partial (6%)
          Length = 526

 Score = 67.9 bits (34), Expect = 3e-11
 Identities = 34/34 (100%)
 Strand = Plus / Minus

                                             
Query: 264 tcgaagatactcagagatgaactttggtcagtaa 297
           ||||||||||||||||||||||||||||||||||
Sbjct: 526 tcgaagatactcagagatgaactttggtcagtaa 493