Miyakogusa Predicted Gene
- Lj3g3v2247050.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2247050.1 tr|Q7XJI9|Q7XJI9_GOSHI Katanin OS=Gossypium
hirsutum GN=KTN1 PE=2 SV=1,87.91,0,seg,NULL; AAA,ATPase, AAA-type,
conserved site; no description,NULL; ATPases associated with a
varie,CUFF.43718.1
(1557 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC81811 homologue to UniRef100_Q7XJI9 Cluster: Katanin;... 1388 0.0
>gnl|LJGI|TC81811 homologue to UniRef100_Q7XJI9 Cluster: Katanin; n=1; Gossypium
hirsutum|Rep: Katanin - Gossypium hirsutum (Upland
cotton) (Gossypium mexicanum), partial (56%)
Length = 1432
Score = 1388 bits (700), Expect = 0.0
Identities = 700/700 (100%)
Strand = Plus / Plus
Query: 330 atcgagtggtccgatggatgatcctgatgtgtggaggccacctagtagagataccagtag 389
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 atcgagtggtccgatggatgatcctgatgtgtggaggccacctagtagagataccagtag 61
Query: 390 aagacccacaaggcctggccaaatgagtactcggaagtcagatggggcatgggctcgagg 449
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 aagacccacaaggcctggccaaatgagtactcggaagtcagatggggcatgggctcgagg 121
Query: 450 tgctactccaagagggggtgcgactgggcgtggtgcaaaggccggtgcaacaagtaaggt 509
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tgctactccaagagggggtgcgactgggcgtggtgcaaaggccggtgcaacaagtaaggt 181
Query: 510 taacacagggacccgagcatcaactaccggaaagaaaagtggtgtttctgggaaggctgg 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 taacacagggacccgagcatcaactaccggaaagaaaagtggtgtttctgggaaggctgg 241
Query: 570 caagacagattcagttattagtgatgctgaagaaagtaagtcaaagaagtcacaatatga 629
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 caagacagattcagttattagtgatgctgaagaaagtaagtcaaagaagtcacaatatga 301
Query: 630 aggtcctgatcctgagttggctgaaatgcttgaaagggatgtgttagaaacctctcctgg 689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 aggtcctgatcctgagttggctgaaatgcttgaaagggatgtgttagaaacctctcctgg 361
Query: 690 agtgagatgggaggatgtcgctgggcttactgaagcaaaaaggcttctagaagaagctgt 749
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 agtgagatgggaggatgtcgctgggcttactgaagcaaaaaggcttctagaagaagctgt 421
Query: 750 tgtgcttcccctatggatgccggaatatttccagggaattaggagaccatggaaaggtgt 809
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tgtgcttcccctatggatgccggaatatttccagggaattaggagaccatggaaaggtgt 481
Query: 810 cctcatgtttggtcctccaggaactgggaagacacttcttgctaaagcagttgctactga 869
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cctcatgtttggtcctccaggaactgggaagacacttcttgctaaagcagttgctactga 541
Query: 870 atgtgggaccactttctttaatgtttcttctgcaactttggcttctaaatggcgtggaga 929
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atgtgggaccactttctttaatgtttcttctgcaactttggcttctaaatggcgtggaga 601
Query: 930 gagtgagcgcatggtgcggtgtttgtttgatcttgcaagagcatatgcaccaagtacaat 989
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagtgagcgcatggtgcggtgtttgtttgatcttgcaagagcatatgcaccaagtacaat 661
Query: 990 tttcattgacgaaattgattctctgtgcaattctaggggg 1029
||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tttcattgacgaaattgattctctgtgcaattctaggggg 701
Score = 319 bits (161), Expect = 3e-86
Identities = 161/161 (100%)
Strand = Plus / Plus
Query: 1028 gggcatctggagagcacgaatcatccagaagggtgaaatctgaacttctagttcaggttg 1087
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 944 gggcatctggagagcacgaatcatccagaagggtgaaatctgaacttctagttcaggttg 1003
Query: 1088 atggtgtaagcaatactgccacaaatgaagatggaagccgtaaaatagtaatggtcttgg 1147
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1004 atggtgtaagcaatactgccacaaatgaagatggaagccgtaaaatagtaatggtcttgg 1063
Query: 1148 cagctactaacttcccatgggacatagatgaggcactgagg 1188
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 1064 cagctactaacttcccatgggacatagatgaggcactgagg 1104
Score = 180 bits (91), Expect = 2e-44
Identities = 91/91 (100%)
Strand = Plus / Plus
Query: 1186 aggagaaggctggaaaagcgtatatatattcctcttccaaattttgagagtcgtaaagag 1245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1232 aggagaaggctggaaaagcgtatatatattcctcttccaaattttgagagtcgtaaagag 1291
Query: 1246 ctgatccgaattaatttgaagactgttgagg 1276
|||||||||||||||||||||||||||||||
Sbjct: 1292 ctgatccgaattaatttgaagactgttgagg 1322