Miyakogusa Predicted Gene
- Lj3g3v2236860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2236860.1 CUFF.43713.1
(1725 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80175 similar to UniRef100_Q1AK42 Cluster: Plastid AT... 3354 0.0
gnl|LJGI|TC59957 homologue to UniRef100_Q1AK42 Cluster: Plastid ... 1378 0.0
gnl|LJGI|FS334949 weakly similar to UniRef100_Q1AK42 Cluster: Pl... 684 0.0
gnl|LJGI|FS333293 weakly similar to UniRef100_Q1AK42 Cluster: Pl... 206 3e-52
>gnl|LJGI|TC80175 similar to UniRef100_Q1AK42 Cluster: Plastid ATP/ADP transport
protein 2; n=1; Manihot esculenta|Rep: Plastid ATP/ADP
transport protein 2 - Manihot esculenta (Cassava)
(Manioc), partial (96%)
Length = 2319
Score = 3354 bits (1692), Expect = 0.0
Identities = 1715/1725 (99%)
Strand = Plus / Plus
Query: 1 atggaagctgttgtccaaaccagaggtcttctctctctccccacaaaccccagaaacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 166 atggaagctgttgtccaaaccagaggtcttctctctctccccacaaaccccagaaacagg 225
Query: 61 gttttgaatttgaacccatcacatggcttaaagcatagatttttctcactaaaaccccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 gttttgaatttgaacccatcacatggcttaaagcatagatttttctcactaaaaccccaa 285
Query: 121 acccttggtgggttttctctaaccaccaatggattccccaaactccatagcatggcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 acccttggtgggttttctctaaccaccaatggattccccaaactccatagcatggcatca 345
Query: 181 aaagccaacacctttggccaaaaggacaagactttgttcatgtgcagggctgaagctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 aaagccaacacctttggccaaaaggacaagactttgttcatgtgcagggctgaagctgct 405
Query: 241 gctgctgcttctgatgggcaacttggggaaattgaggttgagaaaccaaaggttttgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 gctgctgcttctgatgggcaacttggggaaattgaggttgagaaaccaaaggttttgggt 465
Query: 301 attgagattgacacactcaagaagattatacctttggggatgatgnnnnnnngtattctc 360
||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 466 attgagattgacacactcaagaagattatacctttggggatgatgtttttttgtattctc 525
Query: 361 tttaactatacaattctcagagacaccaaggatgttctggttgtgacagctaaaggaagc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 526 tttaactatacaattctcagagacaccaaggatgttctggttgtgacagctaaaggaagc 585
Query: 421 agtgctgagattataccatttctcaaaacatgggtgaatcttcctatggctgttgggttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 586 agtgctgagattataccatttctcaaaacatgggtgaatcttcctatggctgttgggttt 645
Query: 481 atgctgtggtacaccaagttgtctaatgttttgtccaagcaagctttgttttactctgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 646 atgctgtggtacaccaagttgtctaatgttttgtccaagcaagctttgttttactctgtg 705
Query: 541 attgttcctttcattgctttctttggggcttttgggtttgttttgtatcctcttagcaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 706 attgttcctttcattgctttctttggggcttttgggtttgttttgtatcctcttagcaac 765
Query: 601 tatatccaccctgaggcatttgcagacaagcttctcggcatccttggacctcggtttctt 660
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 766 tatatccaccctgaggtatttgcagacaagcttctcggcatccttggacctcggtttctt 825
Query: 661 ggtccgctggcaattatgagaatatggagcttctgtttgttctatgtcatggctgaattg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 826 ggtccgctggcaattatgagaatatggagcttctgtttgttctatgtcatggctgaattg 885
Query: 721 tgggggagtgtggtcatctctgtgctgttctgggggtttgctaatcagataaccactgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 886 tgggggagtgtggtcatctctgtgctgttctgggggtttgctaatcagataaccactgtt 945
Query: 781 gatgaagcaaaacggttctacccactgtttggacttggggccaatgtagcccttatattc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 946 gatgaagcaaaacggttctacccactgtttggacttggggccaatgtagcccttatattc 1005
Query: 841 tctggtcgaacagtgaaatacttttctaatatgaggatgaatttaggtcctggagttgat 900
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1006 tctggtcgaacagtgaaatacttttctaatatgaggatgaattcaggtcctggagttgat 1065
Query: 901 ggttgggccctctctctaaaagcaatgatgagcatagttgtcggtatggggctagcaatc 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 ggttgggccctctctctaaaagcaatgatgagcatagttgtcggtatggggctagcaatc 1125
Query: 961 tgtttcctgtactggtgggtgaataactatgttcctcttcctactcgtagcaagaagaag 1020
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1126 tgtttcctgtactggtgggtgaataactatgttcctcttcctactcgtggcaagaagaag 1185
Query: 1021 aaggagaagcccaaaatgggaaccatggagagcttgaagttcttggtgtcttcaaggtac 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 aaggagaagcccaaaatgggaaccatggagagcttgaagttcttggtgtcttcaaggtac 1245
Query: 1081 ataagagatcttgctactttagtggttgcttatggaattagcatcaatcttgttgaggtt 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 ataagagatcttgctactttagtggttgcttatggaattagcatcaatcttgttgaggtt 1305
Query: 1141 acatggaagtctaagctcaaggctcagtttcctagccctaatgagtactcatcttttatg 1200
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1306 acatggaagtctaagctcaaggctcagtttcctagccctaatgagtactcatcttttatg 1365
Query: 1201 ggcgacttctcgactgcaactggaattgcgacatttacaatgatgcttctgagccaatat 1260
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 ggcgacttctcgactgcaactggaattgcgacatttacaatgatgcttctgagccaatat 1425
Query: 1261 atatttgacaaatatgggtggggagttgctgccaagattacgccaacggtcctgcttctg 1320
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 atatttgacaaatatgggtggggagttgctgccaagattacgccaacggtcctgcttctg 1485
Query: 1321 acaggagttggtttcttctctcttatattgtttggaggcccacttgcacctggtctcgca 1380
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 acaggagttggtttcttctctcttatattgtttggaggcccacttgcacctggtctcgca 1545
Query: 1381 agtattggaatgactcctctactagcagccgtatatgtgggtgctttgcagaacatattt 1440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 agtattggaatgactcctctactagcagccgtatatgtgggtgctttgcagaacatattt 1605
Query: 1441 agcaagagtgctaagtacagcttatttgatccttgcaaagaaatggcatacatacccttg 1500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606 agcaagagtgctaagtacagcttatttgatccttgcaaagaaatggcatacatacccttg 1665
Query: 1501 gatgaggataccaaggttaaggggaaggcagccattgatgtcgtgtgcaacccattagga 1560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1666 gatgaggataccaaggttaaggggaaggcagccattgatgtcgtgtgcaacccattagga 1725
Query: 1561 aagtctggaggtgcccttattcagcaatttatgatcttaactttcggttcactcgctaat 1620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1726 aagtctggaggtgcccttattcagcaatttatgatcttaactttcggttcactcgctaat 1785
Query: 1621 tcaaccccatacctgggcggtgtgcttctggtgattgtccttgcctggctggcagcggcg 1680
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1786 tcaaccccatacctgggcggtgtgcttctggtgattgtccttgcctggctggcagcggcg 1845
Query: 1681 aagtccttggatacccagtttaccgcattgcgacaggaagaagaa 1725
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1846 aagtccttggatacccagtttaccgcattgcgacaggaagaagaa 1890
>gnl|LJGI|TC59957 homologue to UniRef100_Q1AK42 Cluster: Plastid ATP/ADP transport
protein 2; n=1; Manihot esculenta|Rep: Plastid ATP/ADP
transport protein 2 - Manihot esculenta (Cassava)
(Manioc), partial (88%)
Length = 2283
Score = 1378 bits (695), Expect = 0.0
Identities = 1304/1507 (86%), Gaps = 8/1507 (0%)
Strand = Plus / Plus
Query: 213 tttgttcatgtgcagggctgaagctgctgctgctgcttctgatgggcaac------ttgg 266
||||||||| ||||||||||||||||||||||||||| || |||| | | | ||
Sbjct: 325 tttgttcatttgcagggctgaagctgctgctgctgctgatggtgggaagccactgttcgg 384
Query: 267 ggaaattgaggttgagaaaccaaaggttttgggtattgagattgacacactcaagaagat 326
|||| |||||||| ||||| ||| || ||||| ||||| ||| || |||||||||||
Sbjct: 385 ggaatccgaggttgaaaaaccgaagattctgggtgttgaggttgctaccctcaagaagat 444
Query: 327 tatacctttggggatgatgnnnnnnngtattctctttaactatacaattctcagagacac 386
|||||| | ||||||||| | || || || ||||| || ||||| || || ||
Sbjct: 445 tataccacttgggatgatgtttttctgcatcctgttcaactacaccattctaagggatac 504
Query: 387 caaggatgttctggttgtgacagctaaaggaagcagtgctgagattataccatttctcaa 446
||||||||| |||||||||| || || ||||||||||||||||||||||| ||| | ||
Sbjct: 505 taaggatgttttggttgtgacggcgaagggaagcagtgctgagattataccgtttttgaa 564
Query: 447 aacatgggtgaatcttcctatggctgttgggtttatgctgtggtacaccaagttgtctaa 506
||| ||||||||||||||||||||| ||||||||||| ||| ||| ||||||||||| ||
Sbjct: 565 aacttgggtgaatcttcctatggctattgggtttatgttgttgtataccaagttgtcgaa 624
Query: 507 tgttttgtccaagcaagctttgttttactctgtgattgttcctttcattgctttctttgg 566
||| ||||| ||||| |||||||||||| |||| ||||| || || ||||| ||||||||
Sbjct: 625 tgtgttgtctaagcaggctttgttttacactgttattgtcccctttattgcattctttgg 684
Query: 567 ggcttttgggtttgttttgtatcctcttagcaactatatccaccctgaggcatttgcaga 626
||| ||||||||| ||||||| |||||||||| |||||||||||||||||| ||||| ||
Sbjct: 685 ggcatttgggtttcttttgtaccctcttagcagctatatccaccctgaggcgtttgcgga 744
Query: 627 caagcttctcggcatccttggacctcggtttcttggtccgctggcaattatgagaatatg 686
|||||||| ||||||||| || |||| |||||||| || ||||| |||||||| ||
Sbjct: 745 taagcttcttaacatccttgggccgaggttccttggtcctcttgcaatcatgagaatctg 804
Query: 687 gagcttctgtttgttctatgtcatggctgaattgtgggggagtgtggtcatctctgtgct 746
|| ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||
Sbjct: 805 gactttctgtttgttctatgttatggctgaattgtgggggagtgtggttgtttctgtgct 864
Query: 747 gttctgggggtttgctaatcagataaccactgttgatgaagcaaaacggttctacccact 806
||| |||||||| |||||||||||||| || |||||||||||||| ||||||||||||||
Sbjct: 865 gttttgggggttggctaatcagataactacagttgatgaagcaaagcggttctacccact 924
Query: 807 gtttggacttggggccaatgtagcccttatattctctggtcgaacagtgaaatacttttc 866
|||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||
Sbjct: 925 atttggacttggggccaatgtagccctcatattctctggccggacagtgaaatacttttc 984
Query: 867 taatatgaggatgaatttaggtcctggagttgatggttgggccctctctctaaaagcaat 926
|||||||| | |||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 985 caatatgagaagcaatttaggtcctggagttgatggttgggccatctctctaaaagcaat 1044
Query: 927 gatgagcatagttgtcggtatggggctagcaatctgtttcctgtactggtgggtgaataa 986
||||||||||||||| || ||||| || | ||||||||||||||| ||||||||||||||
Sbjct: 1045 gatgagcatagttgtgggcatgggacttgtaatctgtttcctgtattggtgggtgaataa 1104
Query: 987 ctatgttcctcttcctactcgtagcaagaagaagaaggagaagcccaaaatgggaaccat 1046
||||| ||||||||| ||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 1105 ctatgctcctcttccagaacgtagcaggaagaagaaggagaagcccaaaatgggaacaat 1164
Query: 1047 ggagagcttgaagttcttggtgtcttcaaggtacataagagatcttgctactttagtggt 1106
||||||||||||||||||||||||||||| || ||||| ||||||||||| ||||||||
Sbjct: 1165 ggagagcttgaagttcttggtgtcttcaaaatatataagggatcttgctacattagtggt 1224
Query: 1107 tgcttatggaattagcatcaatcttgttgaggttacatggaagtctaagctcaaggctca 1166
||| ||||||||||| |||||||||||||||||||||||||| || |||||||| |||||
Sbjct: 1225 tgcatatggaattagtatcaatcttgttgaggttacatggaaatcaaagctcaaagctca 1284
Query: 1167 gtttcctagccctaatgagtactcatcttttatgggcgacttctcgactgcaactggaat 1226
|| ||||||||| |||||||||||| |||||||||| |||||||| ||||||||||||||
Sbjct: 1285 gtatcctagcccgaatgagtactcagcttttatgggagacttctcaactgcaactggaat 1344
Query: 1227 tgcgacatttacaatgatgcttctgagccaatatatatttgacaaatatgggtggggagt 1286
||| ||||| | |||||||||||| ||||||| | | |||||||||||||| ||||||||
Sbjct: 1345 tgctacattcataatgatgcttctaagccaatttgtttttgacaaatatggatggggagt 1404
Query: 1287 tgctgccaagattacgccaacggtcctgcttctgacaggagttggtttcttctctcttat 1346
||||||||| || ||||| || ||||| || |||| |||||||||||||| ||||| ||
Sbjct: 1405 tgctgccaatatcacgcctaccgtcctactcttgaccggagttggtttcttttctctcat 1464
Query: 1347 attgtttggaggcccacttgcacctggtctcgc-aagtattggaatgactcctctactag 1405
||| ||||| ||||| |||||||| || || ||| |||||||||| || || ||||
Sbjct: 1465 attatttggcggcccgattgcacctatgctagcgcagt-ttggaatgacaccactgctag 1523
Query: 1406 cagccgtatatgtgggtgctttgcagaacatatttagcaagagtgctaagtacagcttat 1465
| || || ||||| ||||| |||||||||||||| ||||||||||| |||||||||||||
Sbjct: 1524 ctgctgtctatgttggtgcgttgcagaacatattcagcaagagtgccaagtacagcttat 1583
Query: 1466 ttgatccttgcaaagaaatggcatacatacccttggatgaggataccaaggttaagggga 1525
| ||||| |||||||||||||| |||||||||||||||||||| |||||||| |||||||
Sbjct: 1584 tcgatccatgcaaagaaatggcctacatacccttggatgaggacaccaaggtcaagggga 1643
Query: 1526 aggcagccattgatgtcgtgtgcaacccattaggaaagtctggaggtgcccttattcagc 1585
|||||||||||||||| || ||||||||||| || || ||||||||||| || |||||||
Sbjct: 1644 aggcagccattgatgttgtttgcaacccattggggaaatctggaggtgctctgattcagc 1703
Query: 1586 aatttatgatcttaactttcggttcactcgctaattcaaccccatacctgggcggtgtgc 1645
| ||||||||||||| ||| |||||||| || |||||||| ||||||||||| || ||||
Sbjct: 1704 agtttatgatcttaagttttggttcactagccaattcaactccatacctgggaggagtgc 1763
Query: 1646 ttctggtgattgtccttgcctggctggcagcggcgaagtccttggatacccagtttaccg 1705
||||||||||||| ||||||||| | ||||| || | |||| |||| || ||||| ||||
Sbjct: 1764 ttctggtgattgttcttgcctggttagcagcagccaggtccctggacactcagttcaccg 1823
Query: 1706 cattgcg 1712
| |||||
Sbjct: 1824 ccttgcg 1830
>gnl|LJGI|FS334949 weakly similar to UniRef100_Q1AK42 Cluster: Plastid ATP/ADP
transport protein 2; n=1; Manihot esculenta|Rep: Plastid
ATP/ADP transport protein 2 - Manihot esculenta
(Cassava) (Manioc), partial (15%)
Length = 610
Score = 684 bits (345), Expect = 0.0
Identities = 345/345 (100%)
Strand = Plus / Plus
Query: 1 atggaagctgttgtccaaaccagaggtcttctctctctccccacaaaccccagaaacagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 atggaagctgttgtccaaaccagaggtcttctctctctccccacaaaccccagaaacagg 318
Query: 61 gttttgaatttgaacccatcacatggcttaaagcatagatttttctcactaaaaccccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 gttttgaatttgaacccatcacatggcttaaagcatagatttttctcactaaaaccccaa 378
Query: 121 acccttggtgggttttctctaaccaccaatggattccccaaactccatagcatggcatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 acccttggtgggttttctctaaccaccaatggattccccaaactccatagcatggcatca 438
Query: 181 aaagccaacacctttggccaaaaggacaagactttgttcatgtgcagggctgaagctgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 aaagccaacacctttggccaaaaggacaagactttgttcatgtgcagggctgaagctgct 498
Query: 241 gctgctgcttctgatgggcaacttggggaaattgaggttgagaaaccaaaggttttgggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 gctgctgcttctgatgggcaacttggggaaattgaggttgagaaaccaaaggttttgggt 558
Query: 301 attgagattgacacactcaagaagattatacctttggggatgatg 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 attgagattgacacactcaagaagattatacctttggggatgatg 603
>gnl|LJGI|FS333293 weakly similar to UniRef100_Q1AK42 Cluster: Plastid ATP/ADP
transport protein 2; n=1; Manihot esculenta|Rep: Plastid
ATP/ADP transport protein 2 - Manihot esculenta
(Cassava) (Manioc), partial (9%)
Length = 716
Score = 206 bits (104), Expect = 3e-52
Identities = 166/186 (89%), Gaps = 13/186 (6%)
Strand = Plus / Plus
Query: 106 tcactaaaaccccaaacccttggtgggttttctctaacc----accaatggattccccaa 161
|||||||||||||||||||||||||||| |||||||||| |||||||||||| | ||
Sbjct: 345 tcactaaaaccccaaacccttggtgggtcttctctaaccaaccaccaatggattctcaaa 404
Query: 162 actccatagcatggcatcaaaagccaacacctttggccaaaaggacaagactttgttcat 221
|||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 405 actccatagcctggcatcaaaagctaacacctttggcaaaaaggacaagactttgttcat 464
Query: 222 gtgcagggctgaagctgctgctgctgcttctgatgggcaac------ttggggaaattga 275
||||||||||||| ||||||||| ||||||||||||||| |||||||||||||
Sbjct: 465 gtgcagggctgaa---gctgctgcttcttctgatgggcaaccagtatttggggaaattga 521
Query: 276 ggttga 281
||||||
Sbjct: 522 ggttga 527
Score = 60.0 bits (30), Expect = 5e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 301 attgagattgacacactcaagaagattatacctttggg 338
|||||| ||||||| |||||||||||||||||||||||
Sbjct: 517 attgaggttgacacgctcaagaagattatacctttggg 554