Miyakogusa Predicted Gene
- Lj3g3v2235770.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2235770.1 Non Chatacterized Hit- tr|K3XTZ7|K3XTZ7_SETIT
Uncharacterized protein OS=Setaria italica GN=Si005404,75.93,7e-19,no
description,Cytochrome c oxidase, subunit Vb;
Q8LBW7_ARATH_Q8LBW7;,Cytochrome c oxidase, subunit ,CUFF.43703.1
(462 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC71186 homologue to UniRef100_Q0KKQ5 Cluster: Cytochro... 916 0.0
gnl|LJGI|TC61651 homologue to UniRef100_Q0KKQ5 Cluster: Cytochro... 916 0.0
gnl|LJGI|TC59146 homologue to UniRef100_Q0KKQ5 Cluster: Cytochro... 634 0.0
gnl|LJGI|DC593585 similar to UniRef100_Q0KKQ5 Cluster: Cytochrom... 361 2e-99
gnl|LJGI|GO010069 similar to UniRef100_Q0KKQ3 Cluster: Cytochrom... 325 1e-88
gnl|LJGI|TC72086 similar to UniRef100_Q0KKQ3 Cluster: Cytochrome... 325 1e-88
gnl|LJGI|BW601355 similar to UniRef100_Q0KKQ3 Cluster: Cytochrom... 125 3e-28
gnl|LJGI|BP076224 homologue to UniRef100_Q0KKQ5 Cluster: Cytochr... 121 4e-27
>gnl|LJGI|TC71186 homologue to UniRef100_Q0KKQ5 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (74%)
Length = 640
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 atgtggcggaggcttctctcttctcacctcaaaaccctagccacttgttctccccaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atgtggcggaggcttctctcttctcacctcaaaaccctagccacttgttctccccaatct 173
Query: 61 gtttccaccgtcgctgctcttaattgctcctccgtttcactcctccgtcacttctctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 gtttccaccgtcgctgctcttaattgctcctccgtttcactcctccgtcacttctctgat 233
Query: 121 actacttcgataaaaaagaaggtcgaagatgtaatgcctatcgctactggtcacgagcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 actacttcgataaaaaagaaggtcgaagatgtaatgcctatcgctactggtcacgagcgc 293
Query: 181 gaggagcttcaagctaaccttgagggaagggatatccttgaaataaatcatcctgttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 gaggagcttcaagctaaccttgagggaagggatatccttgaaataaatcatcctgttggg 353
Query: 241 ccttttggcacaaaggaagcacctgctgttgttaaatcttactatgataagaggatagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ccttttggcacaaaggaagcacctgctgttgttaaatcttactatgataagaggatagtt 413
Query: 301 ggatgcccaggtggtgaaggcgaggatgagcatgatgttgtctggttttggctggagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 ggatgcccaggtggtgaaggcgaggatgagcatgatgttgtctggttttggctggagaaa 473
Query: 361 ggcaagcctcatgaatgtcctgtgtgcgcacagtattttgtgcttgaggtggtgggacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ggcaagcctcatgaatgtcctgtgtgcgcacagtattttgtgcttgaggtggtgggacct 533
Query: 421 ggtggaccacctgatggacatggtgatgatcatcatcattga 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggtggaccacctgatggacatggtgatgatcatcatcattga 575
>gnl|LJGI|TC61651 homologue to UniRef100_Q0KKQ5 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (74%)
Length = 801
Score = 916 bits (462), Expect = 0.0
Identities = 462/462 (100%)
Strand = Plus / Plus
Query: 1 atgtggcggaggcttctctcttctcacctcaaaaccctagccacttgttctccccaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 59 atgtggcggaggcttctctcttctcacctcaaaaccctagccacttgttctccccaatct 118
Query: 61 gtttccaccgtcgctgctcttaattgctcctccgtttcactcctccgtcacttctctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 gtttccaccgtcgctgctcttaattgctcctccgtttcactcctccgtcacttctctgat 178
Query: 121 actacttcgataaaaaagaaggtcgaagatgtaatgcctatcgctactggtcacgagcgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 actacttcgataaaaaagaaggtcgaagatgtaatgcctatcgctactggtcacgagcgc 238
Query: 181 gaggagcttcaagctaaccttgagggaagggatatccttgaaataaatcatcctgttggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gaggagcttcaagctaaccttgagggaagggatatccttgaaataaatcatcctgttggg 298
Query: 241 ccttttggcacaaaggaagcacctgctgttgttaaatcttactatgataagaggatagtt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ccttttggcacaaaggaagcacctgctgttgttaaatcttactatgataagaggatagtt 358
Query: 301 ggatgcccaggtggtgaaggcgaggatgagcatgatgttgtctggttttggctggagaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ggatgcccaggtggtgaaggcgaggatgagcatgatgttgtctggttttggctggagaaa 418
Query: 361 ggcaagcctcatgaatgtcctgtgtgcgcacagtattttgtgcttgaggtggtgggacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ggcaagcctcatgaatgtcctgtgtgcgcacagtattttgtgcttgaggtggtgggacct 478
Query: 421 ggtggaccacctgatggacatggtgatgatcatcatcattga 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ggtggaccacctgatggacatggtgatgatcatcatcattga 520
>gnl|LJGI|TC59146 homologue to UniRef100_Q0KKQ5 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (74%)
Length = 799
Score = 634 bits (320), Expect = 0.0
Identities = 320/320 (100%)
Strand = Plus / Plus
Query: 3 gtggcggaggcttctctcttctcacctcaaaaccctagccacttgttctccccaatctgt 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gtggcggaggcttctctcttctcacctcaaaaccctagccacttgttctccccaatctgt 61
Query: 63 ttccaccgtcgctgctcttaattgctcctccgtttcactcctccgtcacttctctgatac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttccaccgtcgctgctcttaattgctcctccgtttcactcctccgtcacttctctgatac 121
Query: 123 tacttcgataaaaaagaaggtcgaagatgtaatgcctatcgctactggtcacgagcgcga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tacttcgataaaaaagaaggtcgaagatgtaatgcctatcgctactggtcacgagcgcga 181
Query: 183 ggagcttcaagctaaccttgagggaagggatatccttgaaataaatcatcctgttgggcc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ggagcttcaagctaaccttgagggaagggatatccttgaaataaatcatcctgttgggcc 241
Query: 243 ttttggcacaaaggaagcacctgctgttgttaaatcttactatgataagaggatagttgg 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ttttggcacaaaggaagcacctgctgttgttaaatcttactatgataagaggatagttgg 301
Query: 303 atgcccaggtggtgaaggcg 322
||||||||||||||||||||
Sbjct: 302 atgcccaggtggtgaaggcg 321
Score = 280 bits (141), Expect = 7e-75
Identities = 141/141 (100%)
Strand = Plus / Plus
Query: 322 gaggatgagcatgatgttgtctggttttggctggagaaaggcaagcctcatgaatgtcct 381
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 gaggatgagcatgatgttgtctggttttggctggagaaaggcaagcctcatgaatgtcct 507
Query: 382 gtgtgcgcacagtattttgtgcttgaggtggtgggacctggtggaccacctgatggacat 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 gtgtgcgcacagtattttgtgcttgaggtggtgggacctggtggaccacctgatggacat 567
Query: 442 ggtgatgatcatcatcattga 462
|||||||||||||||||||||
Sbjct: 568 ggtgatgatcatcatcattga 588
>gnl|LJGI|DC593585 similar to UniRef100_Q0KKQ5 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (28%)
Length = 566
Score = 361 bits (182), Expect = 2e-99
Identities = 185/186 (99%)
Strand = Plus / Plus
Query: 20 cttctcacctcaaaaccctagccacttgttctccccaatctgtttccaccgtcgctgctc 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cttctcacctcaaaaccctagccacttgttctccccaatctgtttccaccgtcgctgctc 60
Query: 80 ttaattgctcctccgtttcactcctccgtcacttctctgatactacttcgataaaaaaga 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttaattgctcctccgtttcactcctccgtcacttctctgatactacttcgataaaaaaga 120
Query: 140 aggtcgaagatgtaatgcctatcgctactggtcacgagcgcgaggagcttcaagctaacc 199
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 121 aggtcgaagatgtaatgcctatcgctactggtcaggagcgcgaggagcttcaagctaacc 180
Query: 200 ttgagg 205
||||||
Sbjct: 181 ttgagg 186
Score = 107 bits (54), Expect = 6e-23
Identities = 54/54 (100%)
Strand = Plus / Plus
Query: 203 agggaagggatatccttgaaataaatcatcctgttgggccttttggcacaaagg 256
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agggaagggatatccttgaaataaatcatcctgttgggccttttggcacaaagg 324
>gnl|LJGI|GO010069 similar to UniRef100_Q0KKQ3 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (76%)
Length = 727
Score = 325 bits (164), Expect = 1e-88
Identities = 236/260 (90%)
Strand = Plus / Plus
Query: 160 atcgctactggtcacgagcgcgaggagcttcaagctaaccttgagggaagggatatcctt 219
||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||| |||
Sbjct: 304 atcgctactggccacgagcgtgaggagattcaagctgaccttgagggaagggatattctt 363
Query: 220 gaaataaatcatcctgttgggccttttggcacaaaggaagcacctgctgttgttaaatct 279
|| ||||| ||||| | || ||||| || ||||||||||||||||||||||||| |||
Sbjct: 364 gagataaaccatccagaaggtcctttcgggacaaaggaagcacctgctgttgttaggtct 423
Query: 280 tactatgataagaggatagttggatgcccaggtggtgaaggcgaggatgagcatgatgtt 339
|||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 424 tactttgacagaaggatagttggatgcccaggtggcgaaggtgaggatgagcatgatgtt 483
Query: 340 gtctggttttggctggagaaaggcaagcctcatgaatgtcctgtgtgcgcacagtatttt 399
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 484 gtctggttttggctggagaaaggcaagcctcatgagtgtccagtgtgcgcacagtatttt 543
Query: 400 gtgcttgaggtggtgggacc 419
|||||||| |||||||||||
Sbjct: 544 gtgcttgaagtggtgggacc 563
>gnl|LJGI|TC72086 similar to UniRef100_Q0KKQ3 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (86%)
Length = 890
Score = 325 bits (164), Expect = 1e-88
Identities = 236/260 (90%)
Strand = Plus / Plus
Query: 160 atcgctactggtcacgagcgcgaggagcttcaagctaaccttgagggaagggatatcctt 219
||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||| |||
Sbjct: 290 atcgctactggccacgagcgtgaggagattcaagctgaccttgagggaagggatattctt 349
Query: 220 gaaataaatcatcctgttgggccttttggcacaaaggaagcacctgctgttgttaaatct 279
|| ||||| ||||| | || ||||| || ||||||||||||||||||||||||| |||
Sbjct: 350 gagataaaccatccagaaggtcctttcgggacaaaggaagcacctgctgttgttaggtct 409
Query: 280 tactatgataagaggatagttggatgcccaggtggtgaaggcgaggatgagcatgatgtt 339
|||| ||| | ||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 410 tactttgacagaaggatagttggatgcccaggtggcgaaggtgaggatgagcatgatgtt 469
Query: 340 gtctggttttggctggagaaaggcaagcctcatgaatgtcctgtgtgcgcacagtatttt 399
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct: 470 gtctggttttggctggagaaaggcaagcctcatgagtgtccagtgtgcgcacagtatttt 529
Query: 400 gtgcttgaggtggtgggacc 419
|||||||| |||||||||||
Sbjct: 530 gtgcttgaagtggtgggacc 549
>gnl|LJGI|BW601355 similar to UniRef100_Q0KKQ3 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (44%)
Length = 472
Score = 125 bits (63), Expect = 3e-28
Identities = 102/115 (88%)
Strand = Plus / Plus
Query: 160 atcgctactggtcacgagcgcgaggagcttcaagctaaccttgagggaagggatatcctt 219
||||||||||| |||||||| |||||| |||||||| ||||||||||||||||||| |||
Sbjct: 357 atcgctactggccacgagcgtgaggagattcaagctgaccttgagggaagggatattctt 416
Query: 220 gaaataaatcatcctgttgggccttttggcacaaaggaagcacctgctgttgtta 274
|| ||||| ||||| | || ||||| || |||||||||||||||||||||||||
Sbjct: 417 gagataaaccatccagaaggtcctttcgggacaaaggaagcacctgctgttgtta 471
>gnl|LJGI|BP076224 homologue to UniRef100_Q0KKQ5 Cluster: Cytochrome c oxidase subunit
Vb; n=1; Pisum sativum|Rep: Cytochrome c oxidase subunit
Vb - Pisum sativum (Garden pea), partial (12%)
Length = 475
Score = 121 bits (61), Expect = 4e-27
Identities = 61/61 (100%)
Strand = Plus / Minus
Query: 402 gcttgaggtggtgggacctggtggaccacctgatggacatggtgatgatcatcatcattg 461
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gcttgaggtggtgggacctggtggaccacctgatggacatggtgatgatcatcatcattg 191
Query: 462 a 462
|
Sbjct: 190 a 190