Miyakogusa Predicted Gene
- Lj3g3v2224710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2224710.1 Non Chatacterized Hit- tr|E0T2V0|E0T2V0_EDWTF
Putative aspartate racemase OS=Edwardsiella tarda
(str,27.24,1e-16,Aspartate/glutamate racemase,Asp/Glu racemase; no
description,Asp/Glu racemase; seg,NULL; Asp_Glu_ra,CUFF.43687.1
(918 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61358 similar to UniRef100_Q2HVX3 Cluster: Asp/Glu ra... 1237 0.0
gnl|LJGI|TC62683 homologue to UniRef100_Q2HVX3 Cluster: Asp/Glu ... 367 e-101
gnl|LJGI|FS334586 similar to UniRef100_Q2HVX3 Cluster: Asp/Glu r... 58 1e-07
>gnl|LJGI|TC61358 similar to UniRef100_Q2HVX3 Cluster: Asp/Glu racemase; n=1;
Medicago truncatula|Rep: Asp/Glu racemase - Medicago
truncatula (Barrel medic), partial (46%)
Length = 1228
Score = 1237 bits (624), Expect = 0.0
Identities = 627/628 (99%)
Strand = Plus / Plus
Query: 1 atgttcaaagcaatcttaacaccgtctttccagacatcatgttatttcaacccacctaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 atgttcaaagcaatcttaacaccgtctttccagacatcatgttatttcaacccacctaga 326
Query: 61 aacccgtgcaagacaaccaaatcatcaattgttgtaactgcatgtgaaagtggcgaattt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aacccgtgcaagacaaccaaatcatcaattgttgtaactgcatgtgaaagtggcgaattt 386
Query: 121 cccacccctttggtcactctacccaatagcgtgggtgtaattggaggggtttcagtgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cccacccctttggtcactctacccaatagcgtgggtgtaattggaggggtttcagtgaat 446
Query: 181 gccactttgaaatttctaagaaaacttatggaattcagttctgaagatggaggaaatgca 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 447 gccactttgaaatttctaagaaaacttgtggaattcagttctgaagatggaggaaatgca 506
Query: 241 cctccttttgtgatttgttctgatcctctgttgagtaaggagcttttgtcttatgaaaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 cctccttttgtgatttgttctgatcctctgttgagtaaggagcttttgtcttatgaaaga 566
Query: 301 agctatcttgtttcaagcacaagtgaagttgaaggtttgaaattggacacttcctcaatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 agctatcttgtttcaagcacaagtgaagttgaaggtttgaaattggacacttcctcaatt 626
Query: 361 gtgcagagtttgatgagtaaaagggggtttcttgagtgttccggggcgcgttgcgttgtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gtgcagagtttgatgagtaaaagggggtttcttgagtgttccggggcgcgttgcgttgtg 686
Query: 421 atgccttgccatgtttcgcattcttggtatgaagaggtgtctaagggatgttctgttcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 atgccttgccatgtttcgcattcttggtatgaagaggtgtctaagggatgttctgttcct 746
Query: 481 tttcttcacatggcagagtgtgttgcaaggagactgaaggatgctaagttaaagccgctt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 tttcttcacatggcagagtgtgttgcaaggagactgaaggatgctaagttaaagccgctt 806
Query: 541 gaagctggtaatcccttgcggatcggagtgctcgcgactaacgcgactctagcagccggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 807 gaagctggtaatcccttgcggatcggagtgctcgcgactaacgcgactctagcagccggg 866
Query: 601 ttttatcaggagaagcttcagaatgaag 628
||||||||||||||||||||||||||||
Sbjct: 867 ttttatcaggagaagcttcagaatgaag 894
>gnl|LJGI|TC62683 homologue to UniRef100_Q2HVX3 Cluster: Asp/Glu racemase; n=1;
Medicago truncatula|Rep: Asp/Glu racemase - Medicago
truncatula (Barrel medic), partial (43%)
Length = 715
Score = 367 bits (185), Expect = e-101
Identities = 358/413 (86%), Gaps = 2/413 (0%)
Strand = Plus / Plus
Query: 496 gagtgtgttgc-aaggagactgaaggatgctaagttaaagccgcttgaagctggtaatcc 554
||||||||||| |||||| || ||||| || ||||||||||| ||||||||||||| ||
Sbjct: 1 gagtgtgttgccaaggag-ctcaaggaagcaaagttaaagccacttgaagctggtagccc 59
Query: 555 cttgcggatcggagtgctcgcgactaacgcgactctagcagccgggttttatcaggagaa 614
|||||||| ||||||||||| || || || ||||| ||||| || || ||| |||||||
Sbjct: 60 tttgcggattggagtgctcgcaacaaatgcaactcttgcagcaggtttctataaggagaa 119
Query: 615 gcttcagaatgaagggttcgaggttgtgctgcctgatagagcaactatggagcatacagt 674
||||||||||||||| || |||||||| || |||||||||||||| ||||||||||||||
Sbjct: 120 gcttcagaatgaaggatttgaggttgtactacctgatagagcaaccatggagcatacagt 179
Query: 675 gatacctgctatagaagctttggacagaaaagacatggaaggggcatgcaatctatttag 734
|||||||| | ||||||||||||||||| |||| ||||||||||||||||||||| ||
Sbjct: 180 aatacctgcaactgaagctttggacagaaaggacagggaaggggcatgcaatctattgag 239
Query: 735 aattgcgcttcaagttcttctggtaagagccgtgaactctgttatccttgcttctgatga 794
|||||| ||||||||||||||||| || || || || ||||||||||||||||||| ||
Sbjct: 240 aattgcacttcaagttcttctggtgagggcagttaatactgttatccttgcttctgacga 299
Query: 795 tatgcgggatctcttgcccaaagatgatcctcttcttaagaaatgcattgatccaatgga 854
||||||| |||||||||| | || ||||||||||| |||||||| |||||||| | ||
Sbjct: 300 gatgcggggtctcttgccccatgacgatcctcttctcaagaaatgtattgatccgttaga 359
Query: 855 cgccttagcctggtcaactatcaaatgggcaagatcttctgaagataatacat 907
|||||||||| | ||||||||||| |||| |||||| |||| |||||||||||
Sbjct: 360 cgccttagcccgatcaactatcaactgggtaagatcctctggagataatacat 412
>gnl|LJGI|FS334586 similar to UniRef100_Q2HVX3 Cluster: Asp/Glu racemase; n=1;
Medicago truncatula|Rep: Asp/Glu racemase - Medicago
truncatula (Barrel medic), partial (44%)
Length = 715
Score = 58.0 bits (29), Expect = 1e-07
Identities = 50/57 (87%)
Strand = Plus / Plus
Query: 243 tccttttgtgatttgttctgatcctctgttgagtaaggagcttttgtcttatgaaag 299
|||||||||| |||||||||||||| |||||| ||||||||| | || ||||||||
Sbjct: 465 tccttttgtgctttgttctgatcctgtgttgaacaaggagcttctttcctatgaaag 521
Score = 52.0 bits (26), Expect = 6e-06
Identities = 62/74 (83%)
Strand = Plus / Plus
Query: 421 atgccttgccatgtttcgcattcttggtatgaagaggtgtctaagggatgttctgttcct 480
|||||||| |||| || ||||||||||||||| | || || ||||| |||||||| |
Sbjct: 640 atgccttgtaatgtgtcacattcttggtatgaacaagtatccaagggttgttctgtcaca 699
Query: 481 tttcttcacatggc 494
||||||||||||||
Sbjct: 700 tttcttcacatggc 713