Miyakogusa Predicted Gene
- Lj3g3v2188150.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2188150.1 Non Chatacterized Hit- tr|D7SZP3|D7SZP3_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,41.18,2e-17,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; no description,Tetratricopeptide-like hel,CUFF.43655.1
(873 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC595466 weakly similar to UniRef100_Q4RGS1 Cluster: Ch... 882 0.0
gnl|LJGI|BP071849 weakly similar to UniRef100_A7QIP2 Cluster: Ch... 303 1e-81
gnl|LJGI|TC82614 similar to UniRef100_A7PF56 Cluster: Chromosome... 182 2e-45
>gnl|LJGI|DC595466 weakly similar to UniRef100_Q4RGS1 Cluster: Chromosome 4 SCAF15093,
whole genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome 4 SCAF15093, whole genome
shotgun sequence - Tetraodon nigroviridis (Green
puffer), partial (7%)
Length = 478
Score = 882 bits (445), Expect = 0.0
Identities = 468/476 (98%)
Strand = Plus / Plus
Query: 1 atgttacttcgaagctcctctgcaccaattctgagttctttgactgagccagaacacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 atgttacttcgaagctcctctgcaccaattctgagttctttgactgagccagaacacatt 62
Query: 61 cttcaccttcctagaacaacatcagttttaagtctaagccaaaccttagcagacataaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 63 cttcaccttcctagaacaacatcagttttaagtctaagccaaaccttagcagacataaac 122
Query: 121 cttcaaaactcatcatcaagttttaagaagaaaaattgtgtcccacgtagtcatgttctt 180
||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 cttggagggtcatcatcaagttttaagaagaaaaattgtgtcccacgtagtcatgttctt 182
Query: 181 agaaaccaacatagtagcacaaagatcaaagagagaaatggagtgaaagatccacagcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 183 agaaaccaacatagtagcacaaagatcaaagagagaaatggagtgaaagatccacagcta 242
Query: 241 aaaactagcatgaaagcacaatcttctattcaggaactgcttccaagccctggattagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 aaaactagcatgaaagcacaatcttctattcaggaactgcttccaagccctggattagac 302
Query: 301 atgggagtcgtggatcataaaaagtatggtgttgggaaggaagctaagaggttacagact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 atgggagtcgtggatcataaaaagtatggtgttgggaaggaagctaagaggttacagact 362
Query: 361 tcagtggtgggtggtgggatgggaagaaatggtggttgtgatggtagcggaggagggtgg 420
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 363 tcagtggtgggtggtgggatgggaagaaatggtggttgtgatggtancggaggagggtgg 422
Query: 421 gatttttctgaaggaagtaatcatggtagagacaagacagatgcttattaccaaaa 476
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 423 gatttttctgaaggaagtaatcatggtagagaacagacagatgcttattaccaaaa 478
>gnl|LJGI|BP071849 weakly similar to UniRef100_A7QIP2 Cluster: Chromosome chr9
scaffold_104, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_104, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (7%)
Length = 411
Score = 303 bits (153), Expect = 1e-81
Identities = 159/161 (98%)
Strand = Plus / Minus
Query: 713 gttatgtcctagcttcatatgctaatttcctgtgggacgctgaagatgaagaagataaag 772
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gttatgtcctagcttcatatgctaatttcctgtgggacgctgaagatgaagaagataaag 352
Query: 773 acagtcaaaatgaattggatcacagccgtaatgcatatccaaatccaaccgatctctttc 832
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 acagtcacaatgaattggatcacagccgtaatgcatatccaaatccaaccgatctctttc 292
Query: 833 aagaaaataaccatcaccctcatctcactgcagcctcataa 873
||| |||||||||||||||||||||||||||||||||||||
Sbjct: 291 aagtaaataaccatcaccctcatctcactgcagcctcataa 251
>gnl|LJGI|TC82614 similar to UniRef100_A7PF56 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 637
Score = 182 bits (92), Expect = 2e-45
Identities = 206/244 (84%)
Strand = Plus / Plus
Query: 461 atgcttattaccaaaacatgattgaagcaaaccctgatgatgctcttttgctaggaaatt 520
||||||||||||| |||||||||||||||||||| | |||||||||| ||||||||||
Sbjct: 272 atgcttattaccagaacatgattgaagcaaaccccaacaatgctcttttcctaggaaatt 331
Query: 521 atgcaaagtttttgaaagaggttcgtagagactatactaaagcagaagaatatcttgaaa 580
|||| ||||||||||| |||||| || |||| || |||||||||| || ||||||||||
Sbjct: 332 atgctaagtttttgaaggaggtttgtggagattaccctaaagcagaggagtatcttgaaa 391
Query: 581 gggcgattttggctagtcctggtgatggtcatactctgtccctgtatgctgatttaatat 640
| || |||||||||| ||||||||||| | || | | ||||| ||||| |||| ||||
Sbjct: 392 gagccattttggctaatcctggtgatgctaatgttttatccctctatgcgaatttgatat 451
Query: 641 ggcaaacagaaaagaatgctgatcgagctgaacaatactttaatcaagctgttcaaagtg 700
|||||| ||| |||||||||||| |||||||| || ||| ||| ||||||| ||||||
Sbjct: 452 ggcaaaaagagaagaatgctgatagagctgaaggctattttgatcgagctgttaaaagtg 511
Query: 701 cccc 704
||||
Sbjct: 512 cccc 515