Miyakogusa Predicted Gene
- Lj3g3v2185860.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2185860.1 Non Chatacterized Hit- tr|I1KGZ4|I1KGZ4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.39705
PE,75.3,0,Ribonuclease H-like,Ribonuclease H-like domain; seg,NULL;
Dimer_Tnp_hAT,HAT dimerisation; DUF4413,Do,CUFF.43625.1
(1789 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59211 weakly similar to UniRef100_A7PF89 Cluster: Chr... 178 8e-44
gnl|LJGI|TC80716 weakly similar to UniRef100_Q9XI39 Cluster: F9L... 80 5e-14
>gnl|LJGI|TC59211 weakly similar to UniRef100_A7PF89 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (26%)
Length = 810
Score = 178 bits (90), Expect = 8e-44
Identities = 267/326 (81%)
Strand = Plus / Plus
Query: 112 tcatttgatcaggagcgatgcaaccaagacattgctaaaatgattattttacatgattat 171
||||||||||||||||| |||||| | | || ||||||||||||||||| ||||| |||
Sbjct: 444 tcatttgatcaggagcgctgcaacgataagatagctaaaatgattattttgcatgactat 503
Query: 172 cctcttcatatcgtggaacaacagggtttcattgattttgcgcgcattcttcaaccccag 231
|| |||||||| || ||||| | |||||||||||||||||||| |||||||| |||
Sbjct: 504 ccacttcatattgtagaacaccgaggtttcattgattttgcgcgggcacttcaaccacag 563
Query: 232 ttcaatccactatgtttaaaatctattgaagcagattgtgttgctatatacctcaaggag 291
||||| || || ||||||| || | ||| ||||||||||| |||||||||| ||
Sbjct: 564 ttcaacccgctgagtttaaatgctgtccaagaggattgtgttgccatatacctcagaaag 623
Query: 292 aagcaaaatcttttgaattttatcaatgggatttctgctcgagtcaacctgacattggac 351
|||||||| || |||| |||| |||||||| ||| ||||||||||| || ||||||
Sbjct: 624 aagcaaaacctgctgaaacttattgatgggattcctggacgagtcaaccttaccttggac 683
Query: 352 ttatggacgtcaaaccagacaacggtatatgtttttattcgaggacacttcattgatcgt 411
|||||||| ||| | |||||| | | ||||||||| ||||||| ||||| ||||| ||
Sbjct: 684 ttatggacttcagatcagacatcagcctatgtttttcttcgaggtcactttgttgattgt 743
Query: 412 gattggaacttacatcatcctattct 437
|||||||||||||||||||| |||||
Sbjct: 744 gattggaacttacatcatcccattct 769
>gnl|LJGI|TC80716 weakly similar to UniRef100_Q9XI39 Cluster: F9L1.24 protein; n=1;
Arabidopsis thaliana|Rep: F9L1.24 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (10%)
Length = 762
Score = 79.8 bits (40), Expect = 5e-14
Identities = 189/236 (80%), Gaps = 2/236 (0%)
Strand = Plus / Plus
Query: 1531 tttgatattttgagctggtggagagaaaatggattgaggtatccaacattgtccagaatt 1590
||||||||| |||| ||||||||| ||||| ||||| ||| |||||||| || |||||
Sbjct: 358 tttgatattctgagatggtggagaataaatgcattgaagtacccaacattatctagaatg 417
Query: 1591 gcatctgatgttttgtcaattccaatatcaactgtgtctgcagagtt-tgtttttgatac 1649
||||| ||| ||||||| || | ||| ||| | ||||| |||| ||||||||||||
Sbjct: 418 gcatcagatattttgtctatctctgcatctactctccctgca-agttctgtttttgatac 476
Query: 1650 tgaaattagaaaaatggatagctaccgcagttcgttaggctcactcacccttgagtccct 1709
|||||||| |||||||||||||| || ||||| |||| ||| | || |||||| ||||
Sbjct: 477 agaaattaggaaaatggatagctatcggagttcattagactctcctactcttgaggccct 536
Query: 1710 tatttgtgctaaggattggttccagagtaaatgtttacccattgatgtttcaaatg 1765
|||||| | ||||| ||||||| | | ||| |||||||| ||||||||||||
Sbjct: 537 aatttgtaccaaggactggttccggtatgaatcattacccatcaatgtttcaaatg 592