Miyakogusa Predicted Gene
- Lj3g3v2184850.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2184850.1 Non Chatacterized Hit- tr|F6HYM4|F6HYM4_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,31.31,0.0000004,seg,NULL,CUFF.43844.1
(1569 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70689 similar to UniRef100_A7QII9 Cluster: Chromosome... 1402 0.0
gnl|LJGI|CB826986 similar to UniRef100_A7QII9 Cluster: Chromosom... 1047 0.0
gnl|LJGI|TC64771 similar to UniRef100_A7QII9 Cluster: Chromosome... 236 3e-61
>gnl|LJGI|TC70689 similar to UniRef100_A7QII9 Cluster: Chromosome chr9 scaffold_104,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_104, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (26%)
Length = 1452
Score = 1402 bits (707), Expect = 0.0
Identities = 710/711 (99%)
Strand = Plus / Plus
Query: 343 atcaacggttctgataggggaatcagttataggaatgacattgcttcaccgctggaaaaa 402
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 2 atcaacggttctgataggggaatcagttataggaatgacattgcttcaccgttggaaaaa 61
Query: 403 ggagctccaaaagttattgcaggcatgtcatctccgtctagacaatcaaaagctcgaaac 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ggagctccaaaagttattgcaggcatgtcatctccgtctagacaatcaaaagctcgaaac 121
Query: 463 ctatctttgaaggaggactctgttaataaacagacaaaagctcttctgtccaaaaattcc 522
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctatctttgaaggaggactctgttaataaacagacaaaagctcttctgtccaaaaattcc 181
Query: 523 tcggctccagcttctgtaagtcctttggcttcaaagtctgtatcttacaaagaagtggct 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 tcggctccagcttctgtaagtcctttggcttcaaagtctgtatcttacaaagaagtggct 241
Query: 583 gtggcaccgccaggaacagtcttaaagccattgttggaaaaaggtgagatagagagggta 642
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gtggcaccgccaggaacagtcttaaagccattgttggaaaaaggtgagatagagagggta 301
Query: 643 agtgctgaaaatgagatatgcagcagttcatctgtgatgccattaaatgaaggctccagc 702
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 agtgctgaaaatgagatatgcagcagttcatctgtgatgccattaaatgaaggctccagc 361
Query: 703 caaagttccatcattaatccagtttcccaggaagacaaatcagagggaacttgtgaaatt 762
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 caaagttccatcattaatccagtttcccaggaagacaaatcagagggaacttgtgaaatt 421
Query: 763 gaatctcaacaagaaaattctgaaccggagcttgagacagtttcccttgcatctgataag 822
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gaatctcaacaagaaaattctgaaccggagcttgagacagtttcccttgcatctgataag 481
Query: 823 gcaaaactggctgaagcaaattgtagtaagctttcagctgctgccaaaccgttcaatccc 882
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcaaaactggctgaagcaaattgtagtaagctttcagctgctgccaaaccgttcaatccc 541
Query: 883 ggaacactgtccttgtcgcaccagttaaattcagcatccttcacaaccatttatgacgca 942
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 ggaacactgtccttgtcgcaccagttaaattcagcatccttcacaaccatttatgacgca 601
Query: 943 aatgttagccaagccgtgcttgtggagcctgtgctcccccctgcagctgccagggttcct 1002
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 aatgttagccaagccgtgcttgtggagcctgtgctcccccctgcagctgccagggttcct 661
Query: 1003 tgtgggcctagatcacctctatattacagaaccaactacgctttccgcatg 1053
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tgtgggcctagatcacctctatattacagaaccaactacgctttccgcatg 712
Score = 856 bits (432), Expect = 0.0
Identities = 491/517 (94%), Gaps = 1/517 (0%)
Strand = Plus / Plus
Query: 1054 gtcagggaaagaagtggatttggggctccaagaattatgaatcctcatgcacctgaattt 1113
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 gtcagggaaagaagtggatttggggctccaagaattatgaatcctcatgcacctgaattt 799
Query: 1114 gttcctagaggtgcgtctcaaacagagactggtgattctgnnnnnnn-taagctagatga 1172
|||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 800 gttcctagaggtgcgtctcaaacagagactggtgattctgaaaaaaaataagctagatga 859
Query: 1173 tagttctccaaaaaagagcatatctgaatctgagaagtcagagatagcaaggcaaatatt 1232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 tagttctccaaaaaagagcatatctgaatctgagaagtcagagatagcaaggcaaatatt 919
Query: 1233 gctcagttttctagtaaaatctgttcaccaaaatattgattcaacggacgaatctaaagt 1292
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 gctcagttttctagtaaaatctgttcaccaaaatattgattcaacggacgaatctaaagt 979
Query: 1293 tggtgatagaaaaattgagaatttgggaaattcttctgatgacatagcaaaagaaaacgc 1352
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 980 tggtgatagaaaaattgagaatttgggaaattcttctgatgacatagcaaaagacagcgc 1039
Query: 1353 tgtcataaaaattaagtatggtaatgagnnnnnnnncaagacagttactcattcacgtga 1412
|||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1040 tgtcataaaaattaagtatggtaatgaggaaaaaaacaagacagttactcattcacgtga 1099
Query: 1413 aagtgaggagcaagaaaaattagatgtaactgggaaaaaggatggagatagtgaagggtt 1472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1100 aagtgaggagcaagaaaaattagatgtaactgggaaaaaggatggagatagtgaagggtt 1159
Query: 1473 tgtagttgtcacaaacaagnnnnnnnncaggcagaagatcacaaatggagtctcagaatt 1532
||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 1160 tgtagttgtcacaaacaagaaaaaaaacaggcagaagatcacaaatggagtctcagaatt 1219
Query: 1533 gtacaaccagcagtccatctgtgcttcggttcgatga 1569
|||||||||||||||||||||||||||||||||||||
Sbjct: 1220 gtacaaccagcagtccatctgtgcttcggttcgatga 1256
>gnl|LJGI|CB826986 similar to UniRef100_A7QII9 Cluster: Chromosome chr9 scaffold_104,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_104, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 550
Score = 1047 bits (528), Expect = 0.0
Identities = 548/552 (99%), Gaps = 2/552 (0%)
Strand = Plus / Plus
Query: 184 aatggtgatctcacaaggtacacaccggtgacaagtgaagttgtttatgagacatcatca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 1 aatggtgatctcacaaggtacacaccggtgacaagtgaagttgtttatgagacattat-a 59
Query: 244 gatgaaggttggaaagaagccagttcaaaaggacgttcagcaaatgctgcgaaccgcaag 303
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 60 tatgaag-ttggaaagaagccagttcaaaaggacgttcagcaaatgctgcgaaccgcaag 118
Query: 304 tttgcacgcagacaacgacctcatctatcaaagctcagcatcaacggttctgatagggga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tttgcacgcagacaacgacctcatctatcaaagctcagcatcaacggttctgatagggga 178
Query: 364 atcagttataggaatgacattgcttcaccgctggaaaaaggagctccaaaagttattgca 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 atcagttataggaatgacattgcttcaccgctggaaaaaggagctccaaaagttattgca 238
Query: 424 ggcatgtcatctccgtctagacaatcaaaagctcgaaacctatctttgaaggaggactct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 ggcatgtcatctccgtctagacaatcaaaagctcgaaacctatctttgaaggaggactct 298
Query: 484 gttaataaacagacaaaagctcttctgtccaaaaattcctcggctccagcttctgtaagt 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 gttaataaacagacaaaagctcttctgtccaaaaattcctcggctccagcttctgtaagt 358
Query: 544 cctttggcttcaaagtctgtatcttacaaagaagtggctgtggcaccgccaggaacagtc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 cctttggcttcaaagtctgtatcttacaaagaagtggctgtggcaccgccaggaacagtc 418
Query: 604 ttaaagccattgttggaaaaaggtgagatagagagggtaagtgctgaaaatgagatatgc 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 ttaaagccattgttggaaaaaggtgagatagagagggtaagtgctgaaaatgagatatgc 478
Query: 664 agcagttcatctgtgatgccattaaatgaaggctccagccaaagttccatcattaatcca 723
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 agcagttcatctgtgatgccattaaatgaaggctccagccaaagttccatcattaatcca 538
Query: 724 gtttcccaggaa 735
||||||||||||
Sbjct: 539 gtttcccaggaa 550
>gnl|LJGI|TC64771 similar to UniRef100_A7QII9 Cluster: Chromosome chr9 scaffold_104,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_104, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (23%)
Length = 697
Score = 236 bits (119), Expect = 3e-61
Identities = 126/127 (99%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 1 atgattctcagaagaaaaggcgtgcaaaggatagttccagtaagtgataacaactgtgaa 60
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 570 atgattctcagaagaaaaggcgtgcaaag-atagttccagtaagtgataacaactgtgaa 628
Query: 61 gaacatgttgatacagtagctgatgaggacattctttttgataattcaaatgatgctaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 gaacatgttgatacagtagctgatgaggacattctttttgataattcaaatgatgctaaa 688
Query: 121 actacgg 127
|||||||
Sbjct: 689 actacgg 695