Miyakogusa Predicted Gene
- Lj3g3v2174810.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2174810.1 Non Chatacterized Hit- tr|I1P8C0|I1P8C0_ORYGL
Uncharacterized protein OS=Oryza glaberrima PE=4
SV=1,37.5,0.000000000006,seg,NULL,CUFF.43620.1
(957 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS326674 similar to UniRef100_Q10QQ9 Cluster: Expressed... 575 e-163
gnl|LJGI|TC82224 66 4e-10
>gnl|LJGI|FS326674 similar to UniRef100_Q10QQ9 Cluster: Expressed protein; n=1; Oryza
sativa Japonica Group|Rep: Expressed protein - Oryza
sativa subsp. japonica (Rice), partial (5%)
Length = 780
Score = 575 bits (290), Expect = e-163
Identities = 305/310 (98%)
Strand = Plus / Plus
Query: 648 ccatagtaggagccgaagcagaagtcctgctggatcagggagtgggagtagtagtgacag 707
||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 317 ccatagtaggagcagaagcagaagtcccgctggatcagggagtgggagtagtagtgacag 376
Query: 708 tgaaagtgatgcatcttccagtatcaaggaggggctggagggttctgatgaggatgtaga 767
||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 377 tgaaagtgatgcatcttccagtagcaaggagggactggagggttctgatgaggatgtaga 436
Query: 768 tattctgactagtgatgatgaaaaagagtcaaagcacaaaacagaagcctctgatcaaag 827
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 tattctgactagtgatgatgaaaaagagtcaaagcacaaaacagaagcctctgatcaaag 496
Query: 828 gatgtcttttcctgtgccagtaaaatctcctgacaggagatctatgctgatcgaggttga 887
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 gatgtcttttcctgtgccagtaaaatctcctgacaggagatctatgctgatcgaggttga 556
Query: 888 tgagaagcgggatgctaatgaatctgatgctgttgagattgaaaaagactcacctgagga 947
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 tgagaagcgggatgctaatgaatctgatgctgttgagattgaaaaagactcacctgagga 616
Query: 948 actggaacct 957
|| |||||||
Sbjct: 617 acgggaacct 626
Score = 174 bits (88), Expect = 7e-43
Identities = 203/240 (84%), Gaps = 6/240 (2%)
Strand = Plus / Plus
Query: 327 tggaaggtctcctgaagacagccataaccagatacctgctcgtgaagagttgcatgatca 386
|||||| |||| |||||||| | |||||| ||||||||| ||||||||| ||||||||
Sbjct: 2 tggaagttctcttgaagacaatcgtaaccacatacctgctaatgaagagttacatgatca 61
Query: 387 gagatcagctccacagggaggcggctttgaagagagagtctcgaatgacaatgtgggcga 446
|||||||| ||||| ||||||| ||||| ||||||||| | | |||||| ||| ||
Sbjct: 62 gagatcagttccactgggaggc---tttgaggagagagtccccagcgacaatttggagga 118
Query: 447 agtaatagtgcaagtaaaatccaaaggggaagaaaaattaaacccattgaaaataatcga 506
| || ||||||||| |||||||||| |||||| |||||||||||||| ||| ||| ||
Sbjct: 119 a---atggtgcaagtagaatccaaaggagaagaagaattaaacccattggaaaaaattga 175
Query: 507 tgcccaacatacttcacctgatatcgttggtgagaaaaaaggttctgatcaaagtgaagg 566
|||||||||||||||||||||||| |||||||| ||||||||||||| ||| |||||||
Sbjct: 176 tgcccaacatacttcacctgatattgttggtgacaaaaaaggttctgttcatggtgaagg 235
>gnl|LJGI|TC82224
Length = 646
Score = 65.9 bits (33), Expect = 4e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 925 attgaaaaagactcacctgaggaactggaacct 957
|||||||||||||||||||||||||||||||||
Sbjct: 4 attgaaaaagactcacctgaggaactggaacct 36