Miyakogusa Predicted Gene
- Lj3g3v2174800.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2174800.1 Non Chatacterized Hit- tr|C0PJC4|C0PJC4_MAIZE
Uncharacterized protein OS=Zea mays PE=2
SV=1,60.32,0.00000000000003,seg,NULL,CUFF.43616.1
(480 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|DC593223 similar to UniRef100_A7P6U5 Cluster: Chromosom... 636 0.0
gnl|LJGI|TC63033 similar to UniRef100_A7P6U5 Cluster: Chromosome... 555 e-158
gnl|LJGI|AV776616 76 2e-13
>gnl|LJGI|DC593223 similar to UniRef100_A7P6U5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 584
Score = 636 bits (321), Expect = 0.0
Identities = 321/321 (100%)
Strand = Plus / Plus
Query: 1 atgatcataaggctggcccccgacctcgtcgatgagatcaagcgtttggaggctcagggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atgatcataaggctggcccccgacctcgtcgatgagatcaagcgtttggaggctcagggt 323
Query: 61 ctcaatgcgcgtatgaaattcgaccccaaccccaacaaccccaatggaaatatcattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctcaatgcgcgtatgaaattcgaccccaaccccaacaaccccaatggaaatatcattgat 383
Query: 121 gttggtgggaaggaattcagatttacatggtcgagggaacctggtgacctctgtgatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gttggtgggaaggaattcagatttacatggtcgagggaacctggtgacctctgtgatatt 443
Query: 181 tatgaagagccccaaagtggtgaagagggaaatggtttgcttcttgaatcagggtgtgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tatgaagagccccaaagtggtgaagagggaaatggtttgcttcttgaatcagggtgtgcc 503
Query: 241 tggcgcaagctgaatgtacagcgtatcttggatgagtcagctaagaagcaagtcaagatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tggcgcaagctgaatgtacagcgtatcttggatgagtcagctaagaagcaagtcaagatg 563
Query: 301 cggtcaaaggaagctgaactc 321
|||||||||||||||||||||
Sbjct: 564 cggtcaaaggaagctgaactc 584
>gnl|LJGI|TC63033 similar to UniRef100_A7P6U5 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 706
Score = 555 bits (280), Expect = e-158
Identities = 429/478 (89%), Gaps = 3/478 (0%)
Strand = Plus / Plus
Query: 1 atgatcataaggctggcccccgacctcgtcgatgagatcaagcgtttggaggctcagggt 60
|||||||||| |||||| || ||||||||||| ||||||||||| ||||||| ||||||
Sbjct: 210 atgatcataaagctggcgccggacctcgtcgacgagatcaagcgcgtggaggcacagggt 269
Query: 61 ctcaatgcgcgtatgaaattcgaccccaaccccaacaaccccaatggaaatatcattgat 120
|| || |||||||||||||| |||||||||||||| || ||||| || ||||||
Sbjct: 270 ggcaccgctcgtatgaaattcgatcccaaccccaacaattgtaacggaaacattattgat 329
Query: 121 gttggtgggaaggaattcagatttacatggtcgagggaacctggtgacctctgtgatatt 180
|||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||||
Sbjct: 330 gttggtgggaaggaattcagatttacgtggtcgaagga---tggtgacctctgtgatatc 386
Query: 181 tatgaagagccccaaagtggtgaagagggaaatggtttgcttcttgaatcagggtgtgcc 240
||||||||| | ||||||||||||||| |||||||||||| ||||||| |||||||||
Sbjct: 387 tatgaagagaagcgaagtggtgaagaggggaatggtttgcttgttgaatctgggtgtgcc 446
Query: 241 tggcgcaagctgaatgtacagcgtatcttggatgagtcagctaagaagcaagtcaagatg 300
||||||||||| |||||||||||||||||||| |||||| ||||||||||||||||||||
Sbjct: 447 tggcgcaagctcaatgtacagcgtatcttggacgagtcaactaagaagcaagtcaagatg 506
Query: 301 cggtcaaaggaagctgaactcaagcacaagtcacgcaaagccattgtcttagagcctggg 360
|||||||||||||||||||| |||| |||||||||||||||||||||||||||||| |||
Sbjct: 507 cggtcaaaggaagctgaacttaagctcaagtcacgcaaagccattgtcttagagccgggg 566
Query: 361 aacccacatatgaagagccagataaaggcattagcagcagtggaggctacaacatggaaa 420
||||||| | ||||||||||||||||||||||||| || |||||||||||||| ||||||
Sbjct: 567 aacccacctctgaagagccagataaaggcattagctgctgtggaggctacaacctggaaa 626
Query: 421 agttacactaaaaagaaagaggctgcacttaagaaaaggaaagtggagactcttccag 478
| ||||||||||||||||||||| | |||||||||| |||||| ||||||||||||||
Sbjct: 627 aattacactaaaaagaaagaggcggtacttaagaaacggaaagcggagactcttccag 684
>gnl|LJGI|AV776616
Length = 411
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 340 gccattgtcttagagcctgggaacccacatatgaagagccagataaaggcattagcagca 399
||||||||||||||||| || |||||| |||||||||||| |||||||||||||| ||
Sbjct: 331 gccattgtcttagagccgggtaacccatctatgaagagccaaataaaggcattagctgct 390
Query: 400 gtggag 405
||||||
Sbjct: 391 gtggag 396