Miyakogusa Predicted Gene

Lj3g3v2172710.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v2172710.1 CUFF.43611.1
         (366 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC69485 similar to UniRef100_A7QQ79 Cluster: Chromosome...   379   e-105

>gnl|LJGI|TC69485 similar to UniRef100_A7QQ79 Cluster: Chromosome undetermined
           scaffold_141, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_141,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (19%)
          Length = 654

 Score =  379 bits (191), Expect = e-105
 Identities = 206/211 (97%)
 Strand = Plus / Plus

                                                                       
Query: 156 ccactcggtgatcgtttctccttccctctcccaattcaagctcatcatcgttcgatcatg 215
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 79  ccactcggtgatcgtttctccttccctctcccaattcaagctcatcatcgttcgatcatg 138

                                                                       
Query: 216 tcaggtggtgttctgctgcaacttttgtgacaaattgagtacgagaatatttcctaggtg 275
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 139 tcaggtggtgttctgctgcaacttttgtgacaaattgagtacgagaatatttcctagatg 198

                                                                       
Query: 276 ggtggttcgtgttctaggaagcaagatagggatagtgaggaaagtttcggtcgatggttt 335
           |||||| ||||||||||||||||||| |||||||||||||||||||||||| || |||||
Sbjct: 199 ggtggtgcgtgttctaggaagcaagagagggatagtgaggaaagtttcggtagagggttt 258

                                          
Query: 336 tcacgaagatattgcaaatgtgggagtttga 366
           |||||||||||||||||||||||||||||||
Sbjct: 259 tcacgaagatattgcaaatgtgggagtttga 289



 Score =  103 bits (52), Expect = 7e-22
 Identities = 52/52 (100%)
 Strand = Plus / Plus

                                                               
Query: 81  gcactcactcccatgttttccagttttctccttcacctgcaacacacacagt 132
           ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2   gcactcactcccatgttttccagttttctccttcacctgcaacacacacagt 53