Miyakogusa Predicted Gene
- Lj3g3v2172690.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2172690.2 tr|C1EGP2|C1EGP2_MICSR Predicted protein
OS=Micromonas sp. (strain RCC299 / NOUM17) GN=MICPUN_63943
,32.34,1e-18,seg,NULL; RNI-like,NULL; L domain-like,NULL; Leucine-rich
repeat - CC (cysteine-containin,Leucine-ri,CUFF.43609.2
(1143 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67305 similar to UniRef100_Q9LMR0 Cluster: F7H2.8 pro... 731 0.0
gnl|LJGI|GO013738 similar to UniRef100_A7QTK9 Cluster: Chromosom... 428 e-119
gnl|LJGI|GO006992 weakly similar to UniRef100_Q9LMR0 Cluster: F7... 98 1e-19
>gnl|LJGI|TC67305 similar to UniRef100_Q9LMR0 Cluster: F7H2.8 protein; n=1; Arabidopsis
thaliana|Rep: F7H2.8 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (21%)
Length = 653
Score = 731 bits (369), Expect = 0.0
Identities = 369/369 (100%)
Strand = Plus / Plus
Query: 775 gcaagaattacagatttggggacaaactatttgaaaaaatttaagaatctgaggtccttg 834
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaagaattacagatttggggacaaactatttgaaaaaatttaagaatctgaggtccttg 60
Query: 835 gaaatatgtggtggaggattgactgattctggtgtgaaaaatatcaaagatctttcttct 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gaaatatgtggtggaggattgactgattctggtgtgaaaaatatcaaagatctttcttct 120
Query: 895 ctaacatgcttaaatttatcacaaaacagcaaccttacggacaaaaccctggagttaatt 954
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctaacatgcttaaatttatcacaaaacagcaaccttacggacaaaaccctggagttaatt 180
Query: 955 tctgggcttactgggttgatttctttgaatgtttcaaattctcgaatcaccaatgctgga 1014
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tctgggcttactgggttgatttctttgaatgtttcaaattctcgaatcaccaatgctgga 240
Query: 1015 ctgcggcatttgaaaacgctcaagaacttgagatctctgacattggagtcctgtaaggtg 1074
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctgcggcatttgaaaacgctcaagaacttgagatctctgacattggagtcctgtaaggtg 300
Query: 1075 acagcaaatgacattaagaaacttaaatcaacatacctccctaatctggcatgctttcgg 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acagcaaatgacattaagaaacttaaatcaacatacctccctaatctggcatgctttcgg 360
Query: 1135 cctgagtag 1143
|||||||||
Sbjct: 361 cctgagtag 369
>gnl|LJGI|GO013738 similar to UniRef100_A7QTK9 Cluster: Chromosome chr11 scaffold_170,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_170, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 949
Score = 428 bits (216), Expect = e-119
Identities = 464/544 (85%), Gaps = 2/544 (0%)
Strand = Plus / Minus
Query: 599 tgtctagtctggagaaaataaatctgtcattcaccgtgataagtgatagtggtttaagga 658
||||||||||| |||||||||||||||||||||| || | | ||||| | | || || |
Sbjct: 886 tgtctagtctg-agaaaataaatctgtcattcactatggttaatgatact-gcttgagaa 829
Query: 659 aattgcgtggactctcatctctgaagtcacttaatttggatgcctaccaaattactgatg 718
|| | | |||||||||||||| |||||||| |||||||||| |||| ||||||||
Sbjct: 828 aactatgcggactctcatctctcaagtcactaaatttggatgttggccaagttactgatt 769
Query: 719 ttggactggcaacccttacaagtttgactggcctcactgacctcgatttgtttggcgcaa 778
|||||| | |||||| ||||||||||||| |||||||| || ||||||||||| ||||
Sbjct: 768 ctggactagaaaccctagcaagtttgactgggctcactgatctggatttgtttggtgcaa 709
Query: 779 gaattacagatttggggacaaactatttgaaaaaatttaagaatctgaggtccttggaaa 838
|||| |||||||| || ||||||||||||| ||| || ||||| |||||||| ||||||
Sbjct: 708 gaatcacagattttggaacaaactatttgagaaacttcaagaacctgaggtcactggaaa 649
Query: 839 tatgtggtggaggattgactgattctggtgtgaaaaatatcaaagatctttcttctctaa 898
|||| || |||| |||| ||||| ||||| || |||||||||||| ||||||||||| |
Sbjct: 648 tatgcggcggagaattggctgatgatggtgcgagaaatatcaaagagctttcttctctga 589
Query: 899 catgcttaaatttatcacaaaacagcaaccttacggacaaaaccctggagttaatttctg 958
|||| |||||||||||||||||| |||||||||| |||| || ||||| |||||||||
Sbjct: 588 catgtttaaatttatcacaaaactgcaaccttacagacactacgttggagctaatttctg 529
Query: 959 ggcttactgggttgatttctttgaatgtttcaaattctcgaatcaccaatgctggactgc 1018
|||||||||| |||||||| ||||||||||| |||||||| ||||| ||| | |||||||
Sbjct: 528 ggcttactggtttgatttcgttgaatgtttccaattctcgtatcacgaatacaggactgc 469
Query: 1019 ggcatttgaaaacgctcaagaacttgagatctctgacattggagtcctgtaaggtgacag 1078
|||||||||||| |||||||||||||| | |||| |||||||||| ||||||||||| |
Sbjct: 468 agcatttgaaaacactcaagaacttgaggtttctgtcattggagtcttgtaaggtgacgg 409
Query: 1079 caaatgacattaagaaacttaaatcaacatacctccctaatctggcatgctttcggcctg 1138
| |||||||||||||||||| || ||||||||||||| ||||||| | |||||||||| |
Sbjct: 408 ctaatgacattaagaaacttcaaacaacatacctcccgaatctggtaagctttcggcccg 349
Query: 1139 agta 1142
||||
Sbjct: 348 agta 345
>gnl|LJGI|GO006992 weakly similar to UniRef100_Q9LMR0 Cluster: F7H2.8 protein; n=1;
Arabidopsis thaliana|Rep: F7H2.8 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (26%)
Length = 754
Score = 97.6 bits (49), Expect = 1e-19
Identities = 96/109 (88%), Gaps = 2/109 (1%)
Strand = Plus / Plus
Query: 2 tgagtaccttttctggtcttgtgaacttggtcaagttggatttggagagatgtcctagga 61
|||||| | ||||||||||| |||||||| || ||||||||||||||||||||| |||
Sbjct: 633 tgagtaacatttctggtctttctaacttggtgaaattggatttggagagatgtcctcgga 692
Query: 62 ttcatggaggccttgttcatcttcaaggtttaaccaagttggaatctct 110
|||||||| || ||| |||||||||| ||||| ||||||||||||||||
Sbjct: 693 ttcatgga-gcattgctcatcttcaa-gtttatccaagttggaatctct 739