Miyakogusa Predicted Gene
- Lj3g3v2172640.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2172640.2 Non Chatacterized Hit- tr|I1KVH4|I1KVH4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4397 PE=,92.87,0,no
description,WD40/YVTN repeat-like-containing domain; seg,NULL; WD40
repeat-like,WD40-repeat-conta,CUFF.43922.2
(1770 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV407693 similar to UniRef100_A7QQ63 Cluster: Chromosom... 850 0.0
gnl|LJGI|BP073626 homologue to UniRef100_Q9LMQ9 Cluster: F7H2.9 ... 272 7e-72
gnl|LJGI|AV410408 similar to UniRef100_A7PF76 Cluster: Chromosom... 58 2e-07
>gnl|LJGI|AV407693 similar to UniRef100_A7QQ63 Cluster: Chromosome undetermined
scaffold_141, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_141, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(12%)
Length = 429
Score = 850 bits (429), Expect = 0.0
Identities = 429/429 (100%)
Strand = Plus / Plus
Query: 1316 cagaagccttggcaaagcctacaataaatccaatttctgctgcggctgcggctgcaacta 1375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cagaagccttggcaaagcctacaataaatccaatttctgctgcggctgcggctgcaacta 60
Query: 1376 gtgctgcacttgcagagagagcctcatctgtagtagctattactggaatgaatggggatc 1435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gtgctgcacttgcagagagagcctcatctgtagtagctattactggaatgaatggggatc 120
Query: 1436 cccgaaacttgggcgacgttaaacctagaataagcgaagaatccaatgacaagtcaaaaa 1495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cccgaaacttgggcgacgttaaacctagaataagcgaagaatccaatgacaagtcaaaaa 180
Query: 1496 tatggaagctcactgaaattaatgaaccatctcaatgcagaaccttgaagctagtggaga 1555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tatggaagctcactgaaattaatgaaccatctcaatgcagaaccttgaagctagtggaga 240
Query: 1556 atcctagagtaaacaagatatcaaggttgatatatacaaattcaggtaatgctattctag 1615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 atcctagagtaaacaagatatcaaggttgatatatacaaattcaggtaatgctattctag 300
Query: 1616 cattagcatcgaatgccattcacctgctctggaaatggcagcgaactgaccgcagctcat 1675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cattagcatcgaatgccattcacctgctctggaaatggcagcgaactgaccgcagctcat 360
Query: 1676 ctggcaaggccaatgccaccgtgcaacctcagttgtggcaaccatcaagtggcatcctga 1735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctggcaaggccaatgccaccgtgcaacctcagttgtggcaaccatcaagtggcatcctga 420
Query: 1736 tgactaatg 1744
|||||||||
Sbjct: 421 tgactaatg 429
>gnl|LJGI|BP073626 homologue to UniRef100_Q9LMQ9 Cluster: F7H2.9 protein; n=1;
Arabidopsis thaliana|Rep: F7H2.9 protein - Arabidopsis
thaliana (Mouse-ear cress), partial (9%)
Length = 310
Score = 272 bits (137), Expect = 7e-72
Identities = 268/309 (86%), Gaps = 2/309 (0%)
Strand = Plus / Plus
Query: 769 gtttattctgtctgcccacattacaaagagaacattcagttcatcttttcaacagcatta 828
||||||||||||||||| ||||| ||||| |||||||||||||||||||| || ||||
Sbjct: 2 gtttattctgtctgcccgcattataaagaaaacattcagttcatcttttccacggcatgg 61
Query: 829 gatggaaaaataaaagcatggttgtatgacaatttgggatctcgcgttgattatgatgct 888
|||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 62 gatggaaagataaaagcatggttgtatgacaatatgggatctcgtgttgattatgatgca 121
Query: 889 cctggtcgatggtgcacaaccatggcttacagtgctgatggtacaaggctcttttcatgt 948
|| || || |||| |||| ||||| || |||||||||||| |||||||||||||||||
Sbjct: 122 cccggccgtgggtgttcaactatggcctatagtgctgatggttcaaggctcttttcatgt 181
Query: 949 ggaacaagcaaagagggggaatcctctattgtggagtggaacgaaagtgaaggagctgta 1008
||||| ||||| || |||||||| ||||||| || ||||| ||||| ||||||||| |
Sbjct: 182 ggaactagcaaggatggggaatctgctattgttgaatggaatgaaagcgaaggagctttg 241
Query: 1009 aaaaggacttatcaagg-attccgtaagcgatctat-gggtgttgtgcaatttgatacta 1066
||||||||||||||||| || || || |||||| | ||||||||| ||||||||||| |
Sbjct: 242 aaaaggacttatcaaggcttttcgaaaacgatctttggggtgttgtacaatttgatacaa 301
Query: 1067 ccaaaaacc 1075
|||||||||
Sbjct: 302 ccaaaaacc 310
>gnl|LJGI|AV410408 similar to UniRef100_A7PF76 Cluster: Chromosome chr11 scaffold_13,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_13, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 418
Score = 58.0 bits (29), Expect = 2e-07
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 1045 ggtgttgtgcaatttgatactaccaaaaaccgatttttggctgctggtgatga 1097
|||||||| ||||||||||| ||||| || ||||| || ||||||||||||||
Sbjct: 110 ggtgttgtacaatttgataccaccaagaatcgattcttagctgctggtgatga 162