Miyakogusa Predicted Gene
- Lj3g3v2172640.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2172640.1 Non Chatacterized Hit- tr|I1KGY0|I1KGY0_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,90.32,0,seg,NULL;
WD40 repeats,WD40 repeat; WD_REPEATS_1,WD40 repeat, conserved site;
SUBFAMILY NOT NAMED,NU,CUFF.43922.1
(1380 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63678 similar to UniRef100_Q8H6S5 Cluster: CTV.2; n=1... 1746 0.0
gnl|LJGI|AV407693 similar to UniRef100_A7QQ63 Cluster: Chromosom... 821 0.0
gnl|LJGI|BW595831 similar to UniRef100_A8MR25 Cluster: Uncharact... 121 1e-26
gnl|LJGI|BP054521 similar to UniRef100_Q9LMQ9 Cluster: F7H2.9 pr... 103 3e-21
gnl|LJGI|BG662118 homologue to UniRef100_Q2HW32 Cluster: Lissenc... 80 4e-14
gnl|LJGI|TC77203 similar to UniRef100_Q2HW32 Cluster: Lissenceph... 66 6e-10
>gnl|LJGI|TC63678 similar to UniRef100_Q8H6S5 Cluster: CTV.2; n=1; Poncirus
trifoliata|Rep: CTV.2 - Poncirus trifoliata (Hardy
orange), partial (25%)
Length = 1206
Score = 1746 bits (881), Expect = 0.0
Identities = 884/885 (99%)
Strand = Plus / Plus
Query: 496 gaagctttagcctgttttgctctgtccaaaaatgattcatatgtaatgtctgcatcagga 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gaagctttagcctgttttgctctgtccaaaaatgattcatatgtaatgtctgcatcagga 60
Query: 556 gggaaggtatccttgttcaatatgatgacgtttaagacaatgactactttcatgcctccg 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gggaaggtatccttgttcaatatgatgacgtttaagacaatgactactttcatgcctccg 120
Query: 616 ccgcctgcagcaacctttcttgctttccatcctcaggataacaatattattgctataggc 675
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 121 ccgcctgcagcaacctttcttgctttccgtcctcaggataacaatattattgctataggc 180
Query: 676 atggatgattcctctattcagatatataatgtccgtgttgatgaggttaaaagtaaactc 735
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atggatgattcctctattcagatatataatgtccgtgttgatgaggttaaaagtaaactc 240
Query: 736 aaaggccatacaaagaaaataactggtcttgctttctcacatgtattgaatgttctagtt 795
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 aaaggccatacaaagaaaataactggtcttgctttctcacatgtattgaatgttctagtt 300
Query: 796 tcatctggggctgataatcagatttgtgtgtggaatactaatggatgggagaaacaaaag 855
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tcatctggggctgataatcagatttgtgtgtggaatactaatggatgggagaaacaaaag 360
Query: 856 actaggttcttgcagcttccgcacgggaggactccaccagcacaatctgatactcgtgta 915
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 actaggttcttgcagcttccgcacgggaggactccaccagcacaatctgatactcgtgta 420
Query: 916 cagtttcatcaggatcagatacacttcttggttgtacatgaaactcagcttgccatttat 975
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 cagtttcatcaggatcagatacacttcttggttgtacatgaaactcagcttgccatttat 480
Query: 976 gaagcaacaaaactggaaggactaaagcagtggttcccacaagattctgcggcaccaata 1035
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gaagcaacaaaactggaaggactaaagcagtggttcccacaagattctgcggcaccaata 540
Query: 1036 tcgcatgcaactttctcatgtgatagccagctgatatacgccagctttttagacgcaaca 1095
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tcgcatgcaactttctcatgtgatagccagctgatatacgccagctttttagacgcaaca 600
Query: 1096 atctgtgtatttagtgcttcaaatctcagattacgctgccgtatcaatccttctgcttat 1155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atctgtgtatttagtgcttcaaatctcagattacgctgccgtatcaatccttctgcttat 660
Query: 1156 ctcccatcaagtgtcagttccaacgtgcaaccacttgtaatcgccgcacatccgcaagaa 1215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 ctcccatcaagtgtcagttccaacgtgcaaccacttgtaatcgccgcacatccgcaagaa 720
Query: 1216 ccgaatcagtttgctacaggactgtcagatggtaccgttcatgtgtttgagcccctcgag 1275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ccgaatcagtttgctacaggactgtcagatggtaccgttcatgtgtttgagcccctcgag 780
Query: 1276 tctgacggcaagtggggtgtgcctcctccgattgagaatggttcagcaagcaatgtggca 1335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tctgacggcaagtggggtgtgcctcctccgattgagaatggttcagcaagcaatgtggca 840
Query: 1336 gctgcttcaggtggaccttcttcggaacaagctcaaagatgatga 1380
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 gctgcttcaggtggaccttcttcggaacaagctcaaagatgatga 885
>gnl|LJGI|AV407693 similar to UniRef100_A7QQ63 Cluster: Chromosome undetermined
scaffold_141, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_141,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (12%)
Length = 429
Score = 821 bits (414), Expect = 0.0
Identities = 414/414 (100%)
Strand = Plus / Plus
Query: 59 agcctacaataaatccaatttctgctgcggctgcggctgcaactagtgctgcacttgcag 118
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 16 agcctacaataaatccaatttctgctgcggctgcggctgcaactagtgctgcacttgcag 75
Query: 119 agagagcctcatctgtagtagctattactggaatgaatggggatccccgaaacttgggcg 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 agagagcctcatctgtagtagctattactggaatgaatggggatccccgaaacttgggcg 135
Query: 179 acgttaaacctagaataagcgaagaatccaatgacaagtcaaaaatatggaagctcactg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 acgttaaacctagaataagcgaagaatccaatgacaagtcaaaaatatggaagctcactg 195
Query: 239 aaattaatgaaccatctcaatgcagaaccttgaagctagtggagaatcctagagtaaaca 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 aaattaatgaaccatctcaatgcagaaccttgaagctagtggagaatcctagagtaaaca 255
Query: 299 agatatcaaggttgatatatacaaattcaggtaatgctattctagcattagcatcgaatg 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 agatatcaaggttgatatatacaaattcaggtaatgctattctagcattagcatcgaatg 315
Query: 359 ccattcacctgctctggaaatggcagcgaactgaccgcagctcatctggcaaggccaatg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 ccattcacctgctctggaaatggcagcgaactgaccgcagctcatctggcaaggccaatg 375
Query: 419 ccaccgtgcaacctcagttgtggcaaccatcaagtggcatcctgatgactaatg 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ccaccgtgcaacctcagttgtggcaaccatcaagtggcatcctgatgactaatg 429
>gnl|LJGI|BW595831 similar to UniRef100_A8MR25 Cluster: Uncharacterized protein
At1g80490.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At1g80490.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (13%)
Length = 486
Score = 121 bits (61), Expect = 1e-26
Identities = 145/173 (83%)
Strand = Plus / Plus
Query: 508 tgttttgctctgtccaaaaatgattcatatgtaatgtctgcatcaggagggaaggtatcc 567
|||||||| |||||||| |||||||| ||||| |||||||| || || || || | |||
Sbjct: 278 tgttttgcactgtccaagaatgattcgtatgtcatgtctgcttctgggggaaaaatctcc 337
Query: 568 ttgttcaatatgatgacgtttaagacaatgactactttcatgcctccgccgcctgcagca 627
| |||||||||||||| || ||||||||||| ||||||||||| || || || || ||
Sbjct: 338 ctattcaatatgatgacattcaagacaatgacaactttcatgccaccaccaccagctgct 397
Query: 628 acctttcttgctttccatcctcaggataacaatattattgctataggcatgga 680
|| |||||||| || |||||||| || ||||||||||||||||| ||||||||
Sbjct: 398 acatttcttgcatttcatcctcaagacaacaatattattgctattggcatgga 450
>gnl|LJGI|BP054521 similar to UniRef100_Q9LMQ9 Cluster: F7H2.9 protein; n=1; Arabidopsis
thaliana|Rep: F7H2.9 protein - Arabidopsis thaliana
(Mouse-ear cress), partial (4%)
Length = 521
Score = 103 bits (52), Expect = 3e-21
Identities = 114/136 (83%)
Strand = Plus / Minus
Query: 1201 gcacatccgcaagaaccgaatcagtttgctacaggactgtcagatggtaccgttcatgtg 1260
|||||||| |||||||| ||| |||||| |||||||||||||||| ||||||||
Sbjct: 514 gcacatccacaagaaccanatcnatttgctgtaggactgtcagatggtgttgttcatgtc 455
Query: 1261 tttgagcccctcgagtctgacggcaagtggggtgtgcctcctccgattgagaatggttca 1320
|||| |||| |||||||| |||||||||||||||||||| | | ||||||||| |||
Sbjct: 454 gttgaaccccntgagtctgaaggcaagtggggtgtgcctccacntagtgagaatgggtca 395
Query: 1321 gcaagcaatgtggcag 1336
||||||||||| ||||
Sbjct: 394 gcaagcaatgtagcag 379
>gnl|LJGI|BG662118 homologue to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago
truncatula|Rep: Lissencephaly type-1-like homology
motif; CTLH, C-terminal to LisH motif; Nitrous oxide
reductase, N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (12%)
Length = 393
Score = 79.8 bits (40), Expect = 4e-14
Identities = 88/104 (84%)
Strand = Plus / Plus
Query: 619 cctgcagcaacctttcttgctttccatcctcaggataacaatattattgctataggcatg 678
|||||| | |||||||| ||||||||||||||||||||||| |||||||| || || |||
Sbjct: 106 cctgcatctacctttctagctttccatcctcaggataacaacattattgccattgggatg 165
Query: 679 gatgattcctctattcagatatataatgtccgtgttgatgaggt 722
|| ||||| | ||||| || ||||||||| | || ||||||||
Sbjct: 166 gaggattcaaccattcacatctataatgtcagagtggatgaggt 209
>gnl|LJGI|TC77203 similar to UniRef100_Q2HW32 Cluster: Lissencephaly type-1-like
homology motif; CTLH, C-terminal to LisH motif; Nitrous
oxide reductase, N-terminal; WD40-like; Quinonprotein
alcohol dehydrogenase-like; n=1; Medicago
truncatula|Rep: Lissencephaly type-1-like homology
motif; CTLH, C-terminal to LisH motif; Nitrous oxide
reductase, N-terminal; WD40-like; Quinonprotein alcohol
dehydrogenase-like - Medicago truncatula (Barrel medic),
partial (31%)
Length = 1563
Score = 65.9 bits (33), Expect = 6e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 628 acctttcttgctttccatcctcaggataacaatattattgctataggcatggatgattcc 687
|||||||| ||||||||||| ||||||||||| ||||| || || || |||||||||||
Sbjct: 303 acctttctagctttccatccccaggataacaacattatagccattgggatggatgattca 362
Query: 688 tctattcagatatataatgtc 708
| ||||| || |||||||||
Sbjct: 363 accattcacatctataatgtc 383