Miyakogusa Predicted Gene
- Lj3g3v2171540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2171540.1 tr|C1E986|C1E986_MICSR 30S ribosomal protein S15
OS=Micromonas sp. (strain RCC299 / NOUM17)
GN=MICPU,43.48,2e-16,Ribosomal_S15,Ribosomal protein S15; S15/NS1
RNA-binding domain,S15/NS1, RNA-binding; seg,NULL; no d,CUFF.43599.1
(600 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60586 1170 0.0
gnl|LJGI|TC73386 176 1e-43
>gnl|LJGI|TC60586
Length = 1258
Score = 1170 bits (590), Expect = 0.0
Identities = 593/594 (99%)
Strand = Plus / Plus
Query: 1 atgaagttgagggagatggagatgaatgatgataagagcaatttgagcagtgccatgatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 281 atgaagttgagggagatggagatgaatgatgataagagcaatttgagcagtgccatgatg 340
Query: 61 ggagccctgagtaagatagataaagatgaaaagtcaaagaaaccttcactgcagagaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 ggagccctgagtaagatagataaagatgaaaagtcaaagaaaccttcactgcagagaatt 400
Query: 121 gatatgttgggcctgttgggtgggactccagactatttgttgaagcctcctaaagagcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 401 gatatgttgggcctgttgggtgggactccagactatttgttgaagcctcctaaagagcat 460
Query: 181 cttgttgaaaagtacttccatcctgataacttgtcctctgctgaaaagttgaaaattgag 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 461 cttgttaaaaagtacttccatcctgataacttgtcctctgctgaaaagttgaaaattgag 520
Query: 241 ctcacaaaggttagagatgagtttaaaatgtcggagtcagattgtggttctgctcgtgtc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 521 ctcacaaaggttagagatgagtttaaaatgtcggagtcagattgtggttctgctcgtgtc 580
Query: 301 caagttgcacaactcacaactaagattaagcatctatcatcagttctgcacaagaaggat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 caagttgcacaactcacaactaagattaagcatctatcatcagttctgcacaagaaggat 640
Query: 361 gtgcattctcgtaaaggcctggtagcaatggttcagaagagaaaaagtttactgaaatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 gtgcattctcgtaaaggcctggtagcaatggttcagaagagaaaaagtttactgaaatat 700
Query: 421 ctcagaagaaccgactgggattcctattgttttgttatctctaagctaggtttacgtgat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 ctcagaagaaccgactgggattcctattgttttgttatctctaagctaggtttacgtgat 760
Query: 481 aatcctgattatagtcacaaaattcggactaaagctcaatccaatgagaaggaccctggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 761 aatcctgattatagtcacaaaattcggactaaagctcaatccaatgagaaggaccctggt 820
Query: 541 cagaaaaagcggtctaaagctcgatccaaaaagaagaagaccgccaaggtggcc 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 821 cagaaaaagcggtctaaagctcgatccaaaaagaagaagaccgccaaggtggcc 874
>gnl|LJGI|TC73386
Length = 557
Score = 176 bits (89), Expect = 1e-43
Identities = 96/99 (96%)
Strand = Plus / Plus
Query: 502 attcggactaaagctcaatccaatgagaaggaccctggtcagaaaaagcggtctaaagct 561
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct: 1 attcggactaaagctcaatccnatgagaaggacnctggtcagaaaaagcggtctaaagct 60
Query: 562 cgatccaaaaagaagaagaccgccaaggtggccgcctag 600
|||||| ||||||||||||||||||||||||||||||||
Sbjct: 61 cgatcccaaaagaagaagaccgccaaggtggccgcctag 99