Miyakogusa Predicted Gene
- Lj3g3v2170500.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2170500.1 Non Chatacterized Hit- tr|B9SE10|B9SE10_RICCO
Putative uncharacterized protein OS=Ricinus communis G,31.12,2e-18,no
description,Mitochondrial glycoprotein; Mitochondrial glycoprotein
MAM33-like,Mitochondrial glyco,CUFF.43594.1
(711 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC76932 similar to UniRef100_A7Q918 Cluster: Chromosome... 1233 0.0
gnl|LJGI|FS338169 82 5e-15
>gnl|LJGI|TC76932 similar to UniRef100_A7Q918 Cluster: Chromosome chr9 scaffold_65,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_65, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 1059
Score = 1233 bits (622), Expect = 0.0
Identities = 636/643 (98%)
Strand = Plus / Plus
Query: 69 tcttcatcatcaccctcttcaatcatgcatttcccctcacctgcaccgaagaacttacat 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 140 tcttcatcatcaccctcttcaatcatgcatttcccctcacctgcaccgaagaacttacat 199
Query: 129 ctcagacatgcgcaaatcagcttttgaaggaaacattacgagactcctccgcaacgagat 188
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 ctcagacatgcgcaaatcagcttttgaaggaaacattacgagactcctccgcaacgagat 259
Query: 189 tcaatacgagcttcaatcctctccttctgacaaccctagcaacaagtttggttcctttgc 248
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tcaatacgagcttcaatcctctccttctgacaaccctagcaacaagtttggttcctttgc 319
Query: 249 ggtggatggtcgacctggtgagcgatggattacactgagaagacaatttgcgaatgaaga 308
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ggtggatggtcgacctggtgagcgatggattacactgagaagacaatttgcgaatgaaga 379
Query: 309 tattaaagttgaagccaccatgttcgatggagctgttcctgctccccgttcaagtggtgg 368
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tattaaagttgaagccaccatgttcgatggagctgttcctgctccccgttcaagtggtgg 439
Query: 369 tgtggctaatgcggatgaaatgcagctgcacattaccttgattgtcagcatctctaaggg 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtggctaatgcggatgaaatgcagctgcacattaccttgattgtcagcatctctaaggg 499
Query: 429 agatggtggtgtgctggagatcacgtgctctgcttggccagacactatagagataaaaag 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 agatggtggtgtgctggagatcacgtgctctgcttggccagacactatagagataaaaag 559
Query: 489 gctgctcacgcgtgcaaaggaaaagatgccagctgagccctatgctggtcctgatttcga 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gctgctcacgcgtgcaaaggaaaagatgccagctgagccctatgctggtcctgatttcga 619
Query: 549 ggatttagatgatgacttgcaagatagcctttatgatttcttggaggtaaggggtgtaga 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggatttagatgatgacttgcaagatagcctttatgatttcttggaggtaaggggtgtaga 679
Query: 609 tgatgaactggccannnnnnngcatcagtacatgaaacgcaaggataaatctgagttagt 668
|||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgatgaactggccatttttttgcatcagtacatgaaacgcaaggataaatctgagttagt 739
Query: 669 aggatggatggagagggttaaatctttcattgaaaggaaataa 711
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggatggatggagagggttaaatctttcattgaaaggaaataa 782
Score = 58.0 bits (29), Expect = 8e-08
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 1 atggcgcgcctgttccgttccctcagaaa 29
|||||||||||||||||||||||||||||
Sbjct: 72 atggcgcgcctgttccgttccctcagaaa 100
>gnl|LJGI|FS338169
Length = 689
Score = 81.8 bits (41), Expect = 5e-15
Identities = 44/45 (97%)
Strand = Plus / Plus
Query: 171 actcctccgcaacgagattcaatacgagcttcaatcctctccttc 215
||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 62 actcctccgcaacgagattcagtacgagcttcaatcctctccttc 106