Miyakogusa Predicted Gene
- Lj3g3v2169480.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2169480.1 tr|I3SYN2|I3SYN2_LOTJA Golgi SNAP receptor
complex member 1 OS=Lotus japonicus PE=2 SV=1,99.11,0,V-SNARE_C,NULL;
GOS-28 SNARE- RELATED,Golgi SNAP receptor complex, subunit 1;
coiled-coil,NULL,CUFF.43592.1
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60341 similar to UniRef100_A7P5Y4 Cluster: Chromosome... 1336 0.0
gnl|LJGI|GO010716 similar to UniRef100_A7P5Y4 Cluster: Chromosom... 1068 0.0
>gnl|LJGI|TC60341 similar to UniRef100_A7P5Y4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (93%)
Length = 1110
Score = 1336 bits (674), Expect = 0.0
Identities = 677/678 (99%)
Strand = Plus / Plus
Query: 1 atggaggtgcctagttcatgggatgcccttcgcaaacaggccagaaatcttgaagctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 atggaggtgcctagttcatgggatgcccttcgcaaacaggccagaaatcttgaagctcag 175
Query: 61 ttggacgagcggatgagttcttttcgtaaattggtttctgctagtgtttctgcaaaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ttggacgagcggatgagttcttttcgtaaattggtttctgctagtgtttctgcaaaaact 235
Query: 121 gatgctgcagagaatgatctagagtcttggattgaacaattactaaaacaactccaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gatgctgcagagaatgatctagagtcttggattgaacaattactaaaacaactccaacaa 295
Query: 181 gtaaactcacagatgcaagcttgggtatcttctggtggtacagatatggtttctcatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gtaaactcacagatgcaagcttgggtatcttctggtggtacagatatggtttctcatact 355
Query: 241 ttgactagacaccaagaaattcttcaagatatcacccaggagttttatcgtcttcgctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgactagacaccaagaaattcttcaagatatcacccaggagttttatcgtcttcgctca 415
Query: 301 agtcttcgagctaagcaagagcatgcttcactattagaggattttaaagaatttgatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agtcttcgagctaagcaagagcatgcttcactattagaggattttaaagaatttgatcga 475
Query: 361 acaagattagacttggaaacgggtgcaggatctgaacagcatgcactccttaaagaacgt 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 476 acaagattagacttggaaacaggtgcaggatctgaacagcatgcactccttaaagaacgt 535
Query: 421 gcatctatcagccggaatacaggacatgtggacactgttatttcacaagcacaagcaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gcatctatcagccggaatacaggacatgtggacactgttatttcacaagcacaagcaaca 595
Query: 481 ctcggtgcgcttgtcttccagcgttcaacatttggtggcatcaattcaaagatcagcaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 ctcggtgcgcttgtcttccagcgttcaacatttggtggcatcaattcaaagatcagcaat 655
Query: 541 gtgagcggtcgcctcccaacggtaaatagcatactcggggcaataaagcgaaaaaagtca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gtgagcggtcgcctcccaacggtaaatagcatactcggggcaataaagcgaaaaaagtca 715
Query: 601 atggataccattatactctctcttgttgcatctgtatgcatatttctcattttcatctac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 atggataccattatactctctcttgttgcatctgtatgcatatttctcattttcatctac 775
Query: 661 tggctaaccaaatgaggc 678
||||||||||||||||||
Sbjct: 776 tggctaaccaaatgaggc 793
>gnl|LJGI|GO010716 similar to UniRef100_A7P5Y4 Cluster: Chromosome chr4 scaffold_6,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr4 scaffold_6, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (71%)
Length = 705
Score = 1068 bits (539), Expect = 0.0
Identities = 556/559 (99%), Gaps = 2/559 (0%)
Strand = Plus / Plus
Query: 1 atggaggtgcctagttcatgggatgcccttcgcaaacaggccagaaatcttgaagctcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 atggaggtgcctagttcatgggatgcccttcgcaaacaggccagaaatcttgaagctcag 208
Query: 61 ttggacgagcggatgagttcttttcgtaaattggtttctgctagtgtttctgcaaaaact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 ttggacgagcggatgagttcttttcgtaaattggtttctgctagtgtttctgcaaaaact 268
Query: 121 gatgctgcagagaatgatctagagtcttggattgaacaattactaaaacaactccaacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 gatgctgcagagaatgatctagagtcttggattgaacaattactaaaacaactccaacaa 328
Query: 181 gtaaactcacagatgcaagcttgggtatcttctggtggtacagatatggtttctcatact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtaaactcacagatgcaagcttgggtatcttctggtggtacagatatggtttctcatact 388
Query: 241 ttgactagacaccaagaaattcttcaagatatcacccaggagttttatcgtcttcgctca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 ttgactagacaccaagaaattcttcaagatatcacccaggagttttatcgtcttcgctca 448
Query: 301 agtcttcgagctaagcaagagcatgcttcactattagaggattttaaagaatttgatcga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 agtcttcgagctaagcaagagcatgcttcactattagaggattttaaagaatttgatcga 508
Query: 361 acaagattagacttggaaacgggtgcaggatctgaacagcatgcactccttaaagaacgt 420
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 509 acaagattagacttggaaacaggtgcaggatctgaacagcatgcactccttaaagaacgt 568
Query: 421 gcatctatcagccggaatacaggacatgtggacactgttatttcacaagcacaagcaaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 gcatctatcagccggaatacaggacatgtggacactgttatttcacaagcacaagcaaca 628
Query: 481 ctcggtgcgcttgtcttccagcgttcaacatttggtggcatcaattcaaagatcagcaat 540
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 629 ctcggtgcgcttgtcttccagcg-tcaacatttggtggcatcaattc-aagatcagcaat 686
Query: 541 gtgagcggtcgcctcccaa 559
|||||||||||||||||||
Sbjct: 687 gtgagcggtcgcctcccaa 705