Miyakogusa Predicted Gene
- Lj3g3v2057520.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2057520.1 Non Chatacterized Hit- tr|I1M2M6|I1M2M6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.51756 PE,31.03,5e-18,K
homology RNA-binding domain,K Homology domain; no description,NULL;
KH_1,K Homology domain, type 1,CUFF.43531.1
(1257 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70285 similar to UniRef100_A7Q480 Cluster: Chromosome... 1360 0.0
gnl|LJGI|AV412860 similar to UniRef100_A7Q480 Cluster: Chromosom... 488 e-137
>gnl|LJGI|TC70285 similar to UniRef100_A7Q480 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (9%)
Length = 758
Score = 1360 bits (686), Expect = 0.0
Identities = 686/686 (100%)
Strand = Plus / Plus
Query: 1 atgtcctccaacaacaacaacaagcgccgccatgtccccccggcaccaccggaaactgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 73 atgtcctccaacaacaacaacaagcgccgccatgtccccccggcaccaccggaaactgtt 132
Query: 61 ttccgaattttatgtccggccgccgcaaagaccgccgacttactgggcctcgccggcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 ttccgaattttatgtccggccgccgcaaagaccgccgacttactgggcctcgccggcgat 192
Query: 121 ggagttaacattcacgttgacgacttcggcggcggcgacgatcgcctcgttactattgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ggagttaacattcacgttgacgacttcggcggcggcgacgatcgcctcgttactattgtc 252
Query: 181 ggcgccgccgaacatcccgcttcttgcggcggcgatgagtcgccggcgcggcttgcctta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 ggcgccgccgaacatcccgcttcttgcggcggcgatgagtcgccggcgcggcttgcctta 312
Query: 241 attagggtttttgagagaatggtggaggaggagagcacgacttcgaattccgcggtggcg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 attagggtttttgagagaatggtggaggaggagagcacgacttcgaattccgcggtggcg 372
Query: 301 tgtactttggtggcgcccagctatcaggttggaagtatactcgggagaggtggcaagttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tgtactttggtggcgcccagctatcaggttggaagtatactcgggagaggtggcaagttt 432
Query: 361 gctgagaagatcaggcaagagagtggagctcaggttagggttttgcccaaggaccaacct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gctgagaagatcaggcaagagagtggagctcaggttagggttttgcccaaggaccaacct 492
Query: 421 cctcttccttctcctggtgatgagttcattcagataacgggaaactttaatgttgtaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 493 cctcttccttctcctggtgatgagttcattcagataacgggaaactttaatgttgtaaag 552
Query: 481 aaagcgcttctttctgtttcgagctgtctcctggatcatgcgaggatggatgctgagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 aaagcgcttctttctgtttcgagctgtctcctggatcatgcgaggatggatgctgagaat 612
Query: 541 tctggtgcttttgtaccgtctgggcctgggataggtcatggaatggcacctcctgctcag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 tctggtgcttttgtaccgtctgggcctgggataggtcatggaatggcacctcctgctcag 672
Query: 601 ggtgaaccttatcctcaacggggttacgcgccaggcccttatggtcctgatcatcatccc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 673 ggtgaaccttatcctcaacggggttacgcgccaggcccttatggtcctgatcatcatccc 732
Query: 661 agagggtattctccttttccgggtcc 686
||||||||||||||||||||||||||
Sbjct: 733 agagggtattctccttttccgggtcc 758
>gnl|LJGI|AV412860 similar to UniRef100_A7Q480 Cluster: Chromosome chr9 scaffold_49,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_49, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (10%)
Length = 275
Score = 488 bits (246), Expect = e-137
Identities = 246/246 (100%)
Strand = Plus / Plus
Query: 1010 cacaggtaggcttcctcttgggcaaaggaggtcatgttatctctgaaatgcgaagagcca 1069
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 cacaggtaggcttcctcttgggcaaaggaggtcatgttatctctgaaatgcgaagagcca 60
Query: 1070 caggtgctagtattcgtatcttttcaaaggaacagattaaatacattcctcaaaatgaag 1129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caggtgctagtattcgtatcttttcaaaggaacagattaaatacattcctcaaaatgaag 120
Query: 1130 aagttgtacaggttactgggaccttacaatccgtacgagatgccttgtttcatataacca 1189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aagttgtacaggttactgggaccttacaatccgtacgagatgccttgtttcatataacca 180
Query: 1190 gcaaaattcgagaaatcattttcccactgaagacccctcctccaaattttggtgtgccgc 1249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 gcaaaattcgagaaatcattttcccactgaagacccctcctccaaattttggtgtgccgc 240
Query: 1250 cacatt 1255
||||||
Sbjct: 241 cacatt 246