Miyakogusa Predicted Gene
- Lj3g3v2055450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2055450.1 Non Chatacterized Hit- tr|I3T3P4|I3T3P4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,99.5,0,RIBOSOMAL_L30,Ribosomal protein L30, conserved site;
Ribosomal_L30_N,Ribosomal protein L30, N-termin,CUFF.43694.1
(600 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58419 homologue to UniRef100_A7QUB3 Cluster: Chromoso... 1189 0.0
gnl|LJGI|TC62863 weakly similar to UniRef100_A9RG91 Cluster: Pre... 224 5e-58
gnl|LJGI|FS336271 similar to UniRef100_Q2HVI3 Cluster: Ribosomal... 182 2e-45
gnl|LJGI|TC57305 similar to UniRef100_Q2HVI3 Cluster: Ribosomal ... 182 2e-45
gnl|LJGI|TC66655 weakly similar to UniRef100_A8MRH4 Cluster: Unc... 180 7e-45
gnl|LJGI|FS336464 similar to UniRef100_A7QUB3 Cluster: Chromosom... 141 6e-33
gnl|LJGI|BW600173 weakly similar to UniRef100_A7QUB3 Cluster: Ch... 109 2e-23
gnl|LJGI|TC78993 weakly similar to UniRef100_A7PVP5 Cluster: Chr... 94 1e-18
gnl|LJGI|TC71541 similar to UniRef100_A9RTM8 Cluster: Predicted ... 72 4e-12
gnl|LJGI|TC81276 similar to UniRef100_A7QUB3 Cluster: Chromosome... 64 1e-09
>gnl|LJGI|TC58419 homologue to UniRef100_A7QUB3 Cluster: Chromosome chr11
scaffold_177, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_177, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (96%)
Length = 981
Score = 1189 bits (600), Expect = 0.0
Identities = 600/600 (100%)
Strand = Plus / Plus
Query: 1 atgggtgaagaggtgaaggcatttgttccggagtctgtgttgaagaagagaaagagggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atgggtgaagaggtgaaggcatttgttccggagtctgtgttgaagaagagaaagagggag 128
Query: 61 gaggaatgggctttggcgaagaagcaggaggttgaagctgctaagaagaagagagctgag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gaggaatgggctttggcgaagaagcaggaggttgaagctgctaagaagaagagagctgag 188
Query: 121 agccgcaagctgatctacagcagggctaagcagtacgccaaggagtacgatgagcaggag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 agccgcaagctgatctacagcagggctaagcagtacgccaaggagtacgatgagcaggag 248
Query: 181 aaggagttgattcgattgaagcgtgaggctaagttgaaaggtggattttatgttgatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 aaggagttgattcgattgaagcgtgaggctaagttgaaaggtggattttatgttgatcct 308
Query: 241 gaggctaagctcttgtttatcattcgtatccgtggtatcaacgccatgcatcctaagact 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gaggctaagctcttgtttatcattcgtatccgtggtatcaacgccatgcatcctaagact 368
Query: 301 aggaagatcctgcagctattgagattgagacagattttcaatggtgtattccttaaggtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 aggaagatcctgcagctattgagattgagacagattttcaatggtgtattccttaaggtt 428
Query: 361 aacaaagcaacagtcaacatgttgcacagagttgagccttatgttacttttggataccct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aacaaagcaacagtcaacatgttgcacagagttgagccttatgttacttttggataccct 488
Query: 421 aatctgaagagtgtaagggaacttatctacaagagaggttatggcaagttaaacaagcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aatctgaagagtgtaagggaacttatctacaagagaggttatggcaagttaaacaagcag 548
Query: 481 agaactgctcttactgacaactccattgttgagcaggccctgggtaagtttggaatcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agaactgctcttactgacaactccattgttgagcaggccctgggtaagtttggaatcatc 608
Query: 541 tctgttgaagaccttatccatgagatcatgactgttggacctcattttaaggaggcaaac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tctgttgaagaccttatccatgagatcatgactgttggacctcattttaaggaggcaaac 668
>gnl|LJGI|TC62863 weakly similar to UniRef100_A9RG91 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(52%)
Length = 1083
Score = 224 bits (113), Expect = 5e-58
Identities = 273/325 (84%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 61 gaggaatgggctttggcgaagaagcaggaggttgaagctgctaagaagaagagagctgag 120
|||||||| || |||| ||| ||| ||||| ||||||||||||||||||| |||||||||
Sbjct: 306 gaggaatgtgccttggtgaaaaagtaggagcttgaagctgctaagaagaaaagagctgag 365
Query: 121 agccgcaagctgatctacagcagggctaagcagtacgccaaggagtacgatgagcaggag 180
||| | |||||| | ||| || || ||||||||| |||||||||| | |||||||| |
Sbjct: 366 agctgtaagctggcc-acaacaaggttaagcagtatgccaaggagtgcaatgagcagaaa 424
Query: 181 aaggagttgattcgattgaagcgtgaggctaagttgaaaggtggattttatgttgatcct 240
||| | ||||||| |||||| || ||| ||||||||| || |||||||||||||||||
Sbjct: 425 aagtaattgattctattgaaatgtaagggaaagttgaaaagttgattttatgttgatcct 484
Query: 241 gaggctaagctcttgtttatcattcgtatccgtggtatcaacgccatgcatcctaagact 300
|| ||||||||||| ||||| ||||| |||| ||| || || || |||||||||||||
Sbjct: 485 gatgctaagctcttatttattattcgcatccatgggattaatcccctgcatcctaagaca 544
Query: 301 aggaagatcctgcagctattgagattgagacagattttcaatggtgtattccttaaggtt 360
|||| |||| |||| || |||||||||||||||||||| ||||||||||| ||||| |||
Sbjct: 545 aggaggatcttgcaactgttgagattgagacagatttttaatggtgtatttcttaaagtt 604
Query: 361 aacaaagcaacagtcaacatgttgc 385
| |||| ||||| | ||||||||||
Sbjct: 605 agcaaatcaacaatgaacatgttgc 629
>gnl|LJGI|FS336271 similar to UniRef100_Q2HVI3 Cluster: Ribosomal protein L30; n=2;
Medicago truncatula|Rep: Ribosomal protein L30 -
Medicago truncatula (Barrel medic), complete
Length = 841
Score = 182 bits (92), Expect = 2e-45
Identities = 434/548 (79%)
Strand = Plus / Plus
Query: 37 gtgttgaagaagagaaagagggaggaggaatgggctttggcgaagaagcaggaggttgaa 96
|||||||||||| |||||| | ||||||||||| ||||| | ||||||| | | |||
Sbjct: 104 gtgttgaagaagcagaagaggaacgaggaatgggcattggcaacgaagcagcaactcgaa 163
Query: 97 gctgctaagaagaagagagctgagagccgcaagctgatctacagcagggctaagcagtac 156
|| || ||||||||||| |||| ||||||||||| | ||||| || | |||||
Sbjct: 164 gccgccaagaagaagagggctgtatctcgcaagctgatttggagcagagcccaacagtat 223
Query: 157 gccaaggagtacgatgagcaggagaaggagttgattcgattgaagcgtgaggctaagttg 216
|||||||| |||||||||||| |||||||| | || | ||||||||||| |||||| |
Sbjct: 224 gccaaggaatacgatgagcagcagaaggagcttgttaggttgaagcgtgaagctaagctc 283
Query: 217 aaaggtggattttatgttgatcctgaggctaagctcttgtttatcattcgtatccgtggt 276
|| ||||| || ||||| | ||||| |||||||||||||| ||| | | ||| | |||
Sbjct: 284 aagggtgggttctatgtcaaccctgaagctaagctcttgttcatcgtcaggatcagaggt 343
Query: 277 atcaacgccatgcatcctaagactaggaagatcctgcagctattgagattgagacagatt 336
||||| || ||||| || || || |||||||| |||||||| || | |||||||||||
Sbjct: 344 atcaatgctatgcaccccaaaaccaggaagattctgcagcttctgcgtttgagacagatc 403
Query: 337 ttcaatggtgtattccttaaggttaacaaagcaacagtcaacatgttgcacagagttgag 396
|| |||||||||||||| ||||| ||||||||||| || || ||| | || ||||| |||
Sbjct: 404 tttaatggtgtattcctcaaggtcaacaaagcaaccgtgaatatgctacagagagtagag 463
Query: 397 ccttatgttacttttggataccctaatctgaagagtgtaagggaacttatctacaagaga 456
||||||||||||| ||| || |||||| |||||||| | || ||| | |||||||||||
Sbjct: 464 ccttatgttacttatggttatcctaatttgaagagtatcagagaattgatctacaagagg 523
Query: 457 ggttatggcaagttaaacaagcagagaactgctcttactgacaactccattgttgagcag 516
|| || || || | ||||| ||||||| |||| | || |||||||| || |||| |||
Sbjct: 524 ggatacgggaaagttaacaaacagagaattgctttgacagacaactctgttattgaacag 583
Query: 517 gccctgggtaagtttggaatcatctctgttgaagaccttatccatgagatcatgactgtt 576
| || || ||| |||||| || | ||||||| || ||||||||||| ||||||||
Sbjct: 584 actcttgggaagcatggaattatttgcattgaagatctgatccatgagatattgactgtt 643
Query: 577 ggacctca 584
||||||||
Sbjct: 644 ggacctca 651
>gnl|LJGI|TC57305 similar to UniRef100_Q2HVI3 Cluster: Ribosomal protein L30; n=2;
Medicago truncatula|Rep: Ribosomal protein L30 -
Medicago truncatula (Barrel medic), complete
Length = 962
Score = 182 bits (92), Expect = 2e-45
Identities = 434/548 (79%)
Strand = Plus / Plus
Query: 37 gtgttgaagaagagaaagagggaggaggaatgggctttggcgaagaagcaggaggttgaa 96
|||||||||||| |||||| | ||||||||||| ||||| | ||||||| | | |||
Sbjct: 79 gtgttgaagaagcagaagaggaacgaggaatgggcattggcaacgaagcagcaactcgaa 138
Query: 97 gctgctaagaagaagagagctgagagccgcaagctgatctacagcagggctaagcagtac 156
|| || ||||||||||| |||| ||||||||||| | ||||| || | |||||
Sbjct: 139 gccgccaagaagaagagggctgtatctcgcaagctgatttggagcagagcccaacagtat 198
Query: 157 gccaaggagtacgatgagcaggagaaggagttgattcgattgaagcgtgaggctaagttg 216
|||||||| |||||||||||| |||||||| | || | ||||||||||| |||||| |
Sbjct: 199 gccaaggaatacgatgagcagcagaaggagcttgttaggttgaagcgtgaagctaagctc 258
Query: 217 aaaggtggattttatgttgatcctgaggctaagctcttgtttatcattcgtatccgtggt 276
|| ||||| || ||||| | ||||| |||||||||||||| ||| | | ||| | |||
Sbjct: 259 aagggtgggttctatgtcaaccctgaagctaagctcttgttcatcgtcaggatcagaggt 318
Query: 277 atcaacgccatgcatcctaagactaggaagatcctgcagctattgagattgagacagatt 336
||||| || ||||| || || || |||||||| |||||||| || | |||||||||||
Sbjct: 319 atcaatgctatgcaccccaaaaccaggaagattctgcagcttctgcgtttgagacagatc 378
Query: 337 ttcaatggtgtattccttaaggttaacaaagcaacagtcaacatgttgcacagagttgag 396
|| |||||||||||||| ||||| ||||||||||| || || ||| | || ||||| |||
Sbjct: 379 tttaatggtgtattcctcaaggtcaacaaagcaaccgtgaatatgctacagagagtagag 438
Query: 397 ccttatgttacttttggataccctaatctgaagagtgtaagggaacttatctacaagaga 456
||||||||||||| ||| || |||||| |||||||| | || ||| | |||||||||||
Sbjct: 439 ccttatgttacttatggttatcctaatttgaagagtatcagagaattgatctacaagagg 498
Query: 457 ggttatggcaagttaaacaagcagagaactgctcttactgacaactccattgttgagcag 516
|| || || || | ||||| ||||||| |||| | || |||||||| || |||| |||
Sbjct: 499 ggatacgggaaagttaacaaacagagaattgctttgacagacaactctgttattgaacag 558
Query: 517 gccctgggtaagtttggaatcatctctgttgaagaccttatccatgagatcatgactgtt 576
| || || ||| |||||| || | ||||||| || ||||||||||| ||||||||
Sbjct: 559 actcttgggaagcatggaattatttgcattgaagatctgatccatgagatattgactgtt 618
Query: 577 ggacctca 584
||||||||
Sbjct: 619 ggacctca 626
>gnl|LJGI|TC66655 weakly similar to UniRef100_A8MRH4 Cluster: Uncharacterized protein
At2g01250.2; n=1; Arabidopsis thaliana|Rep:
Uncharacterized protein At2g01250.2 - Arabidopsis
thaliana (Mouse-ear cress), partial (59%)
Length = 715
Score = 180 bits (91), Expect = 7e-45
Identities = 240/287 (83%), Gaps = 2/287 (0%)
Strand = Plus / Plus
Query: 86 aggaggttgaagctgctaagaagaagagagctgagagccgcaagctgatctacagcaggg 145
||||| ||||||||||||||||||| || |||||||| | |||||| |||||||| |
Sbjct: 365 aggagcttgaagctgctaagaagaaaagtgctgagagtagtaagctgg-ctacagcaaga 423
Query: 146 ctaagcagtacgccaaggagtacgatgagcaggagaaggagttgattcgattgaagcgtg 205
|||||||||| |||||||||| | |||||||||| || || |||||||||||||| |||
Sbjct: 424 ctaagcagtatgccaaggagtgcaatgagcaggaaaatgaattgattcgattgaaatgtg 483
Query: 206 aggctaagttgaaaggtggattttatgttgatcctgaggctaagctcttgtttatcattc 265
|||| ||| ||||| || |||||||||||||| || | |||||||| ||||| ||||
Sbjct: 484 aggcaaagctgaaaagttgattttatgttgat-aagatgttaagctctgatttattattc 542
Query: 266 gtatccgtggtatcaacgccatgcatcctaagactaggaagatcctgcagctattgagat 325
| ||| ||||||| || ||||||||||||||| |||| |||| || || |||||||||
Sbjct: 543 gcatctgtggtattaatctcatgcatcctaagacaaggaggatcttgtagatattgagat 602
Query: 326 tgagacagattttcaatggtgtattccttaaggttaacaaagcaaca 372
||||||||||||| |||||||| || ||| | ||||||||| |||||
Sbjct: 603 tgagacagatttttaatggtgtttttcttgaagttaacaaatcaaca 649
>gnl|LJGI|FS336464 similar to UniRef100_A7QUB3 Cluster: Chromosome chr11 scaffold_177,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_177, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 806
Score = 141 bits (71), Expect = 6e-33
Identities = 213/260 (81%), Gaps = 4/260 (1%)
Strand = Plus / Plus
Query: 130 ctgatctacagcagggctaagcagtacgccaaggagtacgatgagcaggagaaggagttg 189
|||||||||| |||| |||||| || || ||||||| | |||||||||| | ||| |||
Sbjct: 533 ctgatctacaacaggactaagctgtgcgtgaaggagtgcaatgagcaggaaagggaattg 592
Query: 190 attcgattgaagcgtgaggctaagttgaaaggtggattttatgttgatcctgaggctaag 249
||||||||||| ||||||| ||| |||||||| ||||||||| ||||||| | ||||||
Sbjct: 593 attcgattgaaatgtgaggcaaagctgaaaggttgattttatgctgatcctaatgctaag 652
Query: 250 ----ctcttgtttatcattcgtatccgtggtatcaacgccatgcatcctaagactaggaa 305
||||| | ||| |||| |||| |||||| || | ||||||||||||||| ||||
Sbjct: 653 ctctctcttatgtattgttcgcatccttggtattaatgtcatgcatcctaagacaaggag 712
Query: 306 gatcctgcagctattgagattgagacagattttcaatggtgtattccttaaggttaacaa 365
||| |||||||||||||| | ||| ||||||| |||||||| || ||||| ||||||||
Sbjct: 713 gattttgcagctattgagacttagatagatttttaatggtgtttttcttaaagttaacaa 772
Query: 366 agcaacagtcaacatgttgc 385
| ||||| | || |||||||
Sbjct: 773 atcaacaatgaaaatgttgc 792
>gnl|LJGI|BW600173 weakly similar to UniRef100_A7QUB3 Cluster: Chromosome chr11
scaffold_177, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_177, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (28%)
Length = 476
Score = 109 bits (55), Expect = 2e-23
Identities = 145/175 (82%)
Strand = Plus / Plus
Query: 211 aagttgaaaggtggattttatgttgatcctgaggctaagctcttgtttatcattcgtatc 270
|||||||| || ||||| ||||||||||||| ||||| ||||| ||||| |||| |||
Sbjct: 100 aagttgaagagttgatttcatgttgatcctgatgctaatctcttatttattattctgatc 159
Query: 271 cgtggtatcaacgccatgcatcctaagactaggaagatcctgcagctattgagattgaga 330
| ||| || || || ||||||||||||| |||| |||| |||| || ||||||| || |
Sbjct: 160 catgggattaatcccctgcatcctaagacaaggaggatcttgcatctgttgagatagata 219
Query: 331 cagattttcaatggtgtattccttaaggttaacaaagcaacagtcaacatgttgc 385
|||||||| ||||||||||| ||||| |||| |||| ||||| | ||||||||||
Sbjct: 220 cagatttttaatggtgtatttcttaaagttagcaaatcaacaatgaacatgttgc 274
>gnl|LJGI|TC78993 weakly similar to UniRef100_A7PVP5 Cluster: Chromosome chr9
scaffold_33, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_33, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (32%)
Length = 1136
Score = 93.7 bits (47), Expect = 1e-18
Identities = 198/247 (80%), Gaps = 1/247 (0%)
Strand = Plus / Plus
Query: 86 aggaggttgaagctgctaagaagaagagagctgagagccgcaagctgatctacagcaggg 145
||||| ||||||||||||||||||| |||| ||||| | | ||||||||| | || |
Sbjct: 823 aggagcttgaagctgctaagaagaaaagagtcgagagtggtaccctgatctacggtagag 882
Query: 146 ctaagcagtacgccaaggagta-cgatgagcaggagaaggagttgattcgattgaagcgt 204
|||||| ||| ||| |||||| | |||||| || || || |||||| ||||||| ||
Sbjct: 883 ctaagccgtatgcccaggagtcgccatgagccagaaaatgaattgatttgattgaaatgt 942
Query: 205 gaggctaagttgaaaggtggattttatgttgatcctgaggctaagctcttgtttatcatt 264
|||| || |||||||| |||||||||||||| || | ||||||||||| |||| |||
Sbjct: 943 gaggaaaaactgaaaggtcgattttatgttgattctaatgctaagctcttatttaatatt 1002
Query: 265 cgtatccgtggtatcaacgccatgcatcctaagactaggaagatcctgcagctattgaga 324
|| | ||||||| || |||||||||||||||| |||| |||| || |||||| ||||
Sbjct: 1003 cgcctttgtggtattaatcccatgcatcctaagaccaggaggatcttgaagctatcgaga 1062
Query: 325 ttgagac 331
|||||||
Sbjct: 1063 ttgagac 1069
>gnl|LJGI|TC71541 similar to UniRef100_A9RTM8 Cluster: Predicted protein; n=1;
Physcomitrella patens subsp. patens|Rep: Predicted
protein - Physcomitrella patens subsp. patens, partial
(20%)
Length = 535
Score = 71.9 bits (36), Expect = 4e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 549 agaccttatccatgagatcatgactgttggacctcattttaaggaggcaaac 600
||||| |||||||||||||||||| ||| | |||||||||||||||||||||
Sbjct: 241 agaccgtatccatgagatcatgacggttaggcctcattttaaggaggcaaac 292
>gnl|LJGI|TC81276 similar to UniRef100_A7QUB3 Cluster: Chromosome chr11 scaffold_177,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr11 scaffold_177, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (7%)
Length = 683
Score = 63.9 bits (32), Expect = 1e-09
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 549 agaccttatccatgagatcatgactgttggacctcattttaaggaggcaaac 600
|||| ||||| ||||| ||||||||||| | |||||||||||||||||||||
Sbjct: 401 agactttatcaatgaggtcatgactgtttggcctcattttaaggaggcaaac 452