Miyakogusa Predicted Gene
- Lj3g3v2042220.4
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2042220.4 Non Chatacterized Hit- tr|D8TQL3|D8TQL3_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,45.83,3e-18,RRM_1,RNA recognition motif domain; RNA-BINDING
PROTEIN,NULL; seg,NULL; RNA recognition motif,RNA re,CUFF.43498.4
(678 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63123 homologue to UniRef100_Q8L5G3 Cluster: Proline ... 1249 0.0
gnl|LJGI|TC58835 homologue to UniRef100_Q8L5G3 Cluster: Proline ... 856 0.0
gnl|LJGI|TC72307 homologue to UniRef100_Q8L5G3 Cluster: Proline ... 771 0.0
gnl|LJGI|BW631169 similar to UniRef100_A7PVL5 Cluster: Chromosom... 551 e-156
>gnl|LJGI|TC63123 homologue to UniRef100_Q8L5G3 Cluster: Proline rich protein 3; n=1;
Cicer arietinum|Rep: Proline rich protein 3 - Cicer
arietinum (Chickpea) (Garbanzo), partial (97%)
Length = 1360
Score = 1249 bits (630), Expect = 0.0
Identities = 630/630 (100%)
Strand = Plus / Plus
Query: 1 atgggttttgctctcttctccagtcctcaccaagcaatcgccgccaaagatattcttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atgggttttgctctcttctccagtcctcaccaagcaatcgccgccaaagatattcttcag 354
Query: 61 gacatgctcttcgatcctgaagccaagtccgtcctccacactgaaatggccaagaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 gacatgctcttcgatcctgaagccaagtccgtcctccacactgaaatggccaagaaaaat 414
Query: 121 ctcttcatcaaaagaggaataggggctgatgcagctgcttttgatcagagtaaacggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ctcttcatcaaaagaggaataggggctgatgcagctgcttttgatcagagtaaacggtta 474
Query: 181 aggactgctggggattatacacacactggttatgtaaccccatctccttatcatcctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 aggactgctggggattatacacacactggttatgtaaccccatctccttatcatcctccc 534
Query: 241 ccgcctcccgtttggggaccacatggatacatggctccaccaccacctccgtatgatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ccgcctcccgtttggggaccacatggatacatggctccaccaccacctccgtatgatccg 594
Query: 301 tatgcaggctatcctgttgcacctgtaccgatgcctgctcctgctcccatagcggcgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 tatgcaggctatcctgttgcacctgtaccgatgcctgctcctgctcccatagcggcgcct 654
Query: 361 agcagctatgttccagttcagaacacaaaagacaaccctccctgcaacaccttgtttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 agcagctatgttccagttcagaacacaaaagacaaccctccctgcaacaccttgtttatt 714
Query: 421 ggaaacttgggagagaacattaacgaggaagaagtgaagggccttttcagtgtacaacct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ggaaacttgggagagaacattaacgaggaagaagtgaagggccttttcagtgtacaacct 774
Query: 481 ggctttaagcaaatgaagattttaagacaggagaggcatacggtttgcttcattgaattt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 ggctttaagcaaatgaagattttaagacaggagaggcatacggtttgcttcattgaattt 834
Query: 541 gaagatgtgaatagtgctgccaatgtgcaccatactctgcagggtgccgttattccaagt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 gaagatgtgaatagtgctgccaatgtgcaccatactctgcagggtgccgttattccaagt 894
Query: 601 tctggttcagttggcatgcggatacaatat 630
||||||||||||||||||||||||||||||
Sbjct: 895 tctggttcagttggcatgcggatacaatat 924
>gnl|LJGI|TC58835 homologue to UniRef100_Q8L5G3 Cluster: Proline rich protein 3; n=1;
Cicer arietinum|Rep: Proline rich protein 3 - Cicer
arietinum (Chickpea) (Garbanzo), partial (65%)
Length = 762
Score = 856 bits (432), Expect = 0.0
Identities = 432/432 (100%)
Strand = Plus / Plus
Query: 1 atgggttttgctctcttctccagtcctcaccaagcaatcgccgccaaagatattcttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 atgggttttgctctcttctccagtcctcaccaagcaatcgccgccaaagatattcttcag 390
Query: 61 gacatgctcttcgatcctgaagccaagtccgtcctccacactgaaatggccaagaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gacatgctcttcgatcctgaagccaagtccgtcctccacactgaaatggccaagaaaaat 450
Query: 121 ctcttcatcaaaagaggaataggggctgatgcagctgcttttgatcagagtaaacggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 ctcttcatcaaaagaggaataggggctgatgcagctgcttttgatcagagtaaacggtta 510
Query: 181 aggactgctggggattatacacacactggttatgtaaccccatctccttatcatcctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aggactgctggggattatacacacactggttatgtaaccccatctccttatcatcctccc 570
Query: 241 ccgcctcccgtttggggaccacatggatacatggctccaccaccacctccgtatgatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ccgcctcccgtttggggaccacatggatacatggctccaccaccacctccgtatgatccg 630
Query: 301 tatgcaggctatcctgttgcacctgtaccgatgcctgctcctgctcccatagcggcgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tatgcaggctatcctgttgcacctgtaccgatgcctgctcctgctcccatagcggcgcct 690
Query: 361 agcagctatgttccagttcagaacacaaaagacaaccctccctgcaacaccttgtttatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agcagctatgttccagttcagaacacaaaagacaaccctccctgcaacaccttgtttatt 750
Query: 421 ggaaacttggga 432
||||||||||||
Sbjct: 751 ggaaacttggga 762
>gnl|LJGI|TC72307 homologue to UniRef100_Q8L5G3 Cluster: Proline rich protein 3; n=1;
Cicer arietinum|Rep: Proline rich protein 3 - Cicer
arietinum (Chickpea) (Garbanzo), partial (60%)
Length = 790
Score = 771 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Plus
Query: 1 atgggttttgctctcttctccagtcctcaccaagcaatcgccgccaaagatattcttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 atgggttttgctctcttctccagtcctcaccaagcaatcgccgccaaagatattcttcag 461
Query: 61 gacatgctcttcgatcctgaagccaagtccgtcctccacactgaaatggccaagaaaaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gacatgctcttcgatcctgaagccaagtccgtcctccacactgaaatggccaagaaaaat 521
Query: 121 ctcttcatcaaaagaggaataggggctgatgcagctgcttttgatcagagtaaacggtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 ctcttcatcaaaagaggaataggggctgatgcagctgcttttgatcagagtaaacggtta 581
Query: 181 aggactgctggggattatacacacactggttatgtaaccccatctccttatcatcctccc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggactgctggggattatacacacactggttatgtaaccccatctccttatcatcctccc 641
Query: 241 ccgcctcccgtttggggaccacatggatacatggctccaccaccacctccgtatgatccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 ccgcctcccgtttggggaccacatggatacatggctccaccaccacctccgtatgatccg 701
Query: 301 tatgcaggctatcctgttgcacctgtaccgatgcctgctcctgctcccatagcggcgcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 tatgcaggctatcctgttgcacctgtaccgatgcctgctcctgctcccatagcggcgcct 761
Query: 361 agcagctatgttccagttcagaacacaaa 389
|||||||||||||||||||||||||||||
Sbjct: 762 agcagctatgttccagttcagaacacaaa 790
>gnl|LJGI|BW631169 similar to UniRef100_A7PVL5 Cluster: Chromosome chr9 scaffold_33,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_33, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (41%)
Length = 483
Score = 551 bits (278), Expect = e-156
Identities = 278/278 (100%)
Strand = Plus / Plus
Query: 18 ctccagtcctcaccaagcaatcgccgccaaagatattcttcaggacatgctcttcgatcc 77
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ctccagtcctcaccaagcaatcgccgccaaagatattcttcaggacatgctcttcgatcc 265
Query: 78 tgaagccaagtccgtcctccacactgaaatggccaagaaaaatctcttcatcaaaagagg 137
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tgaagccaagtccgtcctccacactgaaatggccaagaaaaatctcttcatcaaaagagg 325
Query: 138 aataggggctgatgcagctgcttttgatcagagtaaacggttaaggactgctggggatta 197
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aataggggctgatgcagctgcttttgatcagagtaaacggttaaggactgctggggatta 385
Query: 198 tacacacactggttatgtaaccccatctccttatcatcctcccccgcctcccgtttgggg 257
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tacacacactggttatgtaaccccatctccttatcatcctcccccgcctcccgtttgggg 445
Query: 258 accacatggatacatggctccaccaccacctccgtatg 295
||||||||||||||||||||||||||||||||||||||
Sbjct: 446 accacatggatacatggctccaccaccacctccgtatg 483