Miyakogusa Predicted Gene
- Lj3g3v2040010.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2040010.1 tr|Q8W558|Q8W558_9FABA 4-coumarate:CoA ligase
OS=Amorpha fruticosa GN=4CL PE=2 SV=1,86.4,0,AMP_BINDING,AMP-binding,
conserved site; Acetyl-CoA synthetase-like,NULL; no description,NULL;
SUBFA,CUFF.43497.1
(1638 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62381 homologue to UniRef100_Q8W558 Cluster: 4-coumar... 1913 0.0
gnl|LJGI|TC63509 similar to UniRef100_Q8W558 Cluster: 4-coumarat... 1348 0.0
gnl|LJGI|TC59755 homologue to UniRef100_Q8W558 Cluster: 4-coumar... 496 e-139
gnl|LJGI|BF177627 homologue to UniRef100_Q8W558 Cluster: 4-couma... 250 2e-65
gnl|LJGI|TC64265 similar to UniRef100_Q8S564 Cluster: 4-coumarat... 100 5e-20
gnl|LJGI|TC71364 similar to UniRef100_Q8W558 Cluster: 4-coumarat... 90 5e-17
gnl|LJGI|TC70657 homologue to UniRef100_P31687 Cluster: 4-coumar... 74 3e-12
gnl|LJGI|FS350112 similar to UniRef100_P31687 Cluster: 4-coumara... 60 5e-08
gnl|LJGI|TC60308 similar to UniRef100_Q8S564 Cluster: 4-coumarat... 56 7e-07
>gnl|LJGI|TC62381 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (59%)
Length = 1215
Score = 1913 bits (965), Expect = 0.0
Identities = 965/965 (100%)
Strand = Plus / Plus
Query: 674 attgtgaagatgtgatactctgtgttcttcccctgtttcacatttactctctgaactctg 733
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attgtgaagatgtgatactctgtgttcttcccctgtttcacatttactctctgaactctg 60
Query: 734 ttttgctctgtggcttaagagccaaagctgcgattttgttgatgcccaagttcgatattc 793
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttgctctgtggcttaagagccaaagctgcgattttgttgatgcccaagttcgatattc 120
Query: 794 atgctttgctgcctctggtgaacaaatatagaatcaccattatgccggttgtgccgccga 853
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 atgctttgctgcctctggtgaacaaatatagaatcaccattatgccggttgtgccgccga 180
Query: 854 ttgttctggccattgctaagtcccctgatcttgagaaacatgatctttcttccatcaggg 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ttgttctggccattgctaagtcccctgatcttgagaaacatgatctttcttccatcaggg 240
Query: 914 tgttgaaatctggtggagcaccacttgggaaggagcttgaagacagtgtcagggccaaat 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttgaaatctggtggagcaccacttgggaaggagcttgaagacagtgtcagggccaaat 300
Query: 974 tccccaaagccaaacttggacagggttatgggatgacagaggcaggtccagtgttgacaa 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tccccaaagccaaacttggacagggttatgggatgacagaggcaggtccagtgttgacaa 360
Query: 1034 tgtgtttatcatttgctaaagagccgctagatgtgaaatcaggtgcatgtggaactgttg 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tgtgtttatcatttgctaaagagccgctagatgtgaaatcaggtgcatgtggaactgttg 420
Query: 1094 tgaggaatgcagagatgaagattgtggatcccgaaactgatacttctttacctaggaatc 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaggaatgcagagatgaagattgtggatcccgaaactgatacttctttacctaggaatc 480
Query: 1154 aacctggtgaaatttgtattagaggtgaccaaatcatgaaaggttatctaaatgaccctg 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 aacctggtgaaatttgtattagaggtgaccaaatcatgaaaggttatctaaatgaccctg 540
Query: 1214 aggctactgagaggactatagacaaagaaggttggttgcatacaggtgatattggataca 1273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aggctactgagaggactatagacaaagaaggttggttgcatacaggtgatattggataca 600
Query: 1274 tcgacgaagatgatgagttgttcatcgttgataggttgaaggaattgatcaaatataaag 1333
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcgacgaagatgatgagttgttcatcgttgataggttgaaggaattgatcaaatataaag 660
Query: 1334 gttttcaagtggctccagctgaactcgaagcccttattctctcacaccctaagatctcag 1393
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gttttcaagtggctccagctgaactcgaagcccttattctctcacaccctaagatctcag 720
Query: 1394 atgttgctgtggtcccaatgaaggatgaagcagcgggtgaggtcccagttgcatttgtgg 1453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 atgttgctgtggtcccaatgaaggatgaagcagcgggtgaggtcccagttgcatttgtgg 780
Query: 1454 tgagatcaaatggttgtacagacactactgaggatgaaattaagcagttcgtttccaaac 1513
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 781 tgagatcaaatggttgtacagacactactgaggatgaaattaagcagttcgtttccaaac 840
Query: 1514 aggtggtgttttacaaaagaataaaccgggtgttcttcattgatgccattcccaagtcac 1573
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 841 aggtggtgttttacaaaagaataaaccgggtgttcttcattgatgccattcccaagtcac 900
Query: 1574 cctcaggcaaaatattacgaaaggacctaagggccaagcttgcagcgggtgttaccaatt 1633
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 901 cctcaggcaaaatattacgaaaggacctaagggccaagcttgcagcgggtgttaccaatt 960
Query: 1634 gaata 1638
|||||
Sbjct: 961 gaata 965
>gnl|LJGI|TC63509 similar to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (39%)
Length = 774
Score = 1348 bits (680), Expect = 0.0
Identities = 680/680 (100%)
Strand = Plus / Plus
Query: 1 atggcaatcgagaacaaggagcaaaaaccaaccaaggaggagttcattttcaagtccaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 95 atggcaatcgagaacaaggagcaaaaaccaaccaaggaggagttcattttcaagtccaag 154
Query: 61 cttcctgatatctacattcccaaacaccttcccctacattcatactgctttgaaaatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 cttcctgatatctacattcccaaacaccttcccctacattcatactgctttgaaaatctc 214
Query: 121 tcagagttcggttcacgcccttgtttgataaacgctccaaccggtgacattttcacttac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tcagagttcggttcacgcccttgtttgataaacgctccaaccggtgacattttcacttac 274
Query: 181 cacgacgtggacctcaaggcacgacgagtagcttctggtctcaacaaattgggtgtccaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 275 cacgacgtggacctcaaggcacgacgagtagcttctggtctcaacaaattgggtgtccaa 334
Query: 241 caaggtgatgttatcatgatcctcctccctaacactccagaatatgtgttttctttcctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 caaggtgatgttatcatgatcctcctccctaacactccagaatatgtgttttctttcctc 394
Query: 301 ggcgcttcctttctcggcgccatgacaaccgccgcaaaccccttcttcaccgccgctgaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 ggcgcttcctttctcggcgccatgacaaccgccgcaaaccccttcttcaccgccgctgaa 454
Query: 361 atcgccaaacaagcaaaagcttcaaattccaagttgatcataacacaagcgtcttactat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 455 atcgccaaacaagcaaaagcttcaaattccaagttgatcataacacaagcgtcttactat 514
Query: 421 gaaaaggtgaaggacttggatttgaagctggttttcattgattctcctccaaatgggtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 gaaaaggtgaaggacttggatttgaagctggttttcattgattctcctccaaatgggtac 574
Query: 481 ttgcatttcagtgaaattgctgattctgatgaaaatgaaatgccagaggtgaagatcaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 575 ttgcatttcagtgaaattgctgattctgatgaaaatgaaatgccagaggtgaagatcaac 634
Query: 541 cctgatgatgttgtagcattgccttattcttcaggaacaacagggcttccaaaaggggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 cctgatgatgttgtagcattgccttattcttcaggaacaacagggcttccaaaaggggtt 694
Query: 601 atgctaacacacaaggggttagttaccagcattgctcaacaagttgatggagagaatcca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 atgctaacacacaaggggttagttaccagcattgctcaacaagttgatggagagaatcca 754
Query: 661 aacctctattaccattgtga 680
||||||||||||||||||||
Sbjct: 755 aacctctattaccattgtga 774
>gnl|LJGI|TC59755 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (34%)
Length = 833
Score = 496 bits (250), Expect = e-139
Identities = 448/514 (87%)
Strand = Plus / Plus
Query: 1073 caggtgcatgtggaactgttgtgaggaatgcagagatgaagattgtggatcccgaaactg 1132
|||||||||| ||||| ||||| ||||||||||||||||||||||||||||| |||||||
Sbjct: 3 caggtgcatgcggaaccgttgtaaggaatgcagagatgaagattgtggatcctgaaactg 62
Query: 1133 atacttctttacctaggaatcaacctggtgaaatttgtattagaggtgaccaaatcatga 1192
| || |||| || | || || ||||||||||||| || ||||||||||| |||||||
Sbjct: 63 gcaattatttatctcgaaaccagtctggtgaaatttgcataagaggtgaccagatcatga 122
Query: 1193 aaggttatctaaatgaccctgaggctactgagaggactatagacaaagaaggttggttgc 1252
|||||||||||||||| || ||| |||| ||||| || |||||||||| |||||||| |
Sbjct: 123 aaggttatctaaatgatccagagactacggagagaacgatagacaaagggggttggttac 182
Query: 1253 atacaggtgatattggatacatcgacgaagatgatgagttgttcatcgttgataggttga 1312
|||||||||| ||||| || || ||||| |||||||||||||||||||||||||||||||
Sbjct: 183 atacaggtgacattggttatattgacgatgatgatgagttgttcatcgttgataggttga 242
Query: 1313 aggaattgatcaaatataaaggttttcaagtggctccagctgaactcgaagcccttattc 1372
|||||||||||||||| ||||| ||||| || |||||||||||||| ||||||||| |||
Sbjct: 243 aggaattgatcaaatacaaaggatttcaggttgctccagctgaacttgaagcccttcttc 302
Query: 1373 tctcacaccctaagatctcagatgttgctgtggtcccaatgaaggatgaagcagcgggtg 1432
| || || || || ||||| ||||||||||| ||||| ||||||||||||||||| || |
Sbjct: 303 tttctcatcccaaaatctctgatgttgctgttgtcccgatgaaggatgaagcagctggag 362
Query: 1433 aggtcccagttgcatttgtggtgagatcaaatggttgtacagacactactgaggatgaaa 1492
|||| |||||||||||||| ||||||||||||||| || |||| | ||||||||||
Sbjct: 363 aggtaccagttgcatttgttgtgagatcaaatggtcacaccgacataaacgaggatgaaa 422
Query: 1493 ttaagcagttcgtttccaaacaggtggtgttttacaaaagaataaaccgggtgttcttca 1552
|||||||||| | |||||||||||||| |||||||||||||||||| | || |||||||
Sbjct: 423 ttaagcagtttatctccaaacaggtggtattttacaaaagaataaacagagtattcttca 482
Query: 1553 ttgatgccattcccaagtcaccctcaggcaaaat 1586
||||||| |||||||||||||| |||||||||||
Sbjct: 483 ttgatgcaattcccaagtcaccatcaggcaaaat 516
>gnl|LJGI|BF177627 homologue to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (11%)
Length = 425
Score = 250 bits (126), Expect = 2e-65
Identities = 126/126 (100%)
Strand = Plus / Plus
Query: 1513 caggtggtgttttacaaaagaataaaccgggtgttcttcattgatgccattcccaagtca 1572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 caggtggtgttttacaaaagaataaaccgggtgttcttcattgatgccattcccaagtca 222
Query: 1573 ccctcaggcaaaatattacgaaaggacctaagggccaagcttgcagcgggtgttaccaat 1632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 ccctcaggcaaaatattacgaaaggacctaagggccaagcttgcagcgggtgttaccaat 282
Query: 1633 tgaata 1638
||||||
Sbjct: 283 tgaata 288
Score = 143 bits (72), Expect = 4e-33
Identities = 72/72 (100%)
Strand = Plus / Plus
Query: 1446 atttgtggtgagatcaaatggttgtacagacactactgaggatgaaattaagcagttcgt 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atttgtggtgagatcaaatggttgtacagacactactgaggatgaaattaagcagttcgt 60
Query: 1506 ttccaaacaggt 1517
||||||||||||
Sbjct: 61 ttccaaacaggt 72
>gnl|LJGI|TC64265 similar to UniRef100_Q8S564 Cluster: 4-coumarate:coenzyme A ligase;
n=1; Glycine max|Rep: 4-coumarate:coenzyme A ligase -
Glycine max (Soybean), partial (27%)
Length = 737
Score = 99.6 bits (50), Expect = 5e-20
Identities = 292/372 (78%), Gaps = 3/372 (0%)
Strand = Plus / Plus
Query: 1232 tagacaaagaaggttggttgcatacaggtgatattggatacatcgacgaagatgatgagt 1291
||||||||||||| ||||| ||||| |||||||| || | ||||||||| |||||||||
Sbjct: 41 tagacaaagaagggtggttacataccggtgatataggtttcatcgacgatgatgatgagc 100
Query: 1292 tgttcatcgttgataggttgaaggaattgatcaaatataaaggttttcaagtggctccag 1351
| |||||||| ||| | || ||||| || |||||||| ||||| || ||||| ||||| |
Sbjct: 101 ttttcatcgtcgatcgattaaaggagttaatcaaatacaaaggattccaagtagctcctg 160
Query: 1352 ctgaactcgaagcccttattctctcacaccctaagatctcagatgttgctgtggtcccaa 1411
| || |||||||| | | | | ||||| || || || |||| |||||| || ||
Sbjct: 161 ccgagctcgaagcattgttgattgctcacccaaacatttctgatgctgctgttgtaccct 220
Query: 1412 tgaaggatgaagcagcgggtgaggtcccagttgcatttgtggtgagatcaaatggttgta 1471
|||| |||||||| || || || | |||||||||||| | |||||||||||||||| ||
Sbjct: 221 tgaaagatgaagctgcaggagaattaccagttgcatttatcgtgagatcaaatggttcta 280
Query: 1472 cagacactactgaggatgaaattaagcagttcgtttccaaacaggtggtgttttacaaaa 1531
| | || || |||||||| || |||| | |||| ||||||||||| |||||||| |
Sbjct: 281 ---agatcaccgacgatgaaatcaaacagtacatttcaaaacaggtggtattttacaaga 337
Query: 1532 gaataaaccgggtgttcttcattgatgccattcccaagtcaccctcaggcaaaatattac 1591
|||| ||| | || ||||||| || |||||||| || || ||||||||||||| | |
Sbjct: 338 gaatcaacagagttttcttcacggacgccattcctaaagcagcctcaggcaaaattctgc 397
Query: 1592 gaaaggacctaa 1603
||||||| ||||
Sbjct: 398 gaaaggaactaa 409
>gnl|LJGI|TC71364 similar to UniRef100_Q8W558 Cluster: 4-coumarate:CoA ligase; n=1;
Amorpha fruticosa|Rep: 4-coumarate:CoA ligase - Amorpha
fruticosa, partial (25%)
Length = 528
Score = 89.7 bits (45), Expect = 5e-17
Identities = 120/145 (82%)
Strand = Plus / Plus
Query: 236 tccaacaaggtgatgttatcatgatcctcctccctaacactccagaatatgtgttttctt 295
||||| |||| || || ||||||||||||||||| ||| | || |||| || || || |
Sbjct: 312 tccaaaaaggagacgtcatcatgatcctcctccccaactcccctgaattcgtcttctcct 371
Query: 296 tcctcggcgcttcctttctcggcgccatgacaaccgccgcaaaccccttcttcaccgccg 355
|||||| ||| || |||||||||||| | ||||||||||| ||||||||||||||||
Sbjct: 372 tcctcgccgcatctcacctcggcgccatggccaccgccgcaaatcccttcttcaccgccg 431
Query: 356 ctgaaatcgccaaacaagcaaaagc 380
| ||||||||||| ||||| |||||
Sbjct: 432 cggaaatcgccaagcaagccaaagc 456
Score = 75.8 bits (38), Expect = 8e-13
Identities = 68/78 (87%)
Strand = Plus / Plus
Query: 43 ttcattttcaagtccaagcttcctgatatctacattcccaaacaccttcccctacattca 102
|||||||||| ||||||||| ||||| |||||||| |||||||||||||| || || ||
Sbjct: 116 ttcattttcaggtccaagctccctgacatctacatccccaaacaccttcctctccactct 175
Query: 103 tactgctttgaaaatctc 120
|||||||| ||||||||
Sbjct: 176 tactgcttccaaaatctc 193
>gnl|LJGI|TC70657 homologue to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2;
n=1; Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine
max (Soybean), partial (31%)
Length = 964
Score = 73.8 bits (37), Expect = 3e-12
Identities = 106/129 (82%)
Strand = Plus / Plus
Query: 1240 gaaggttggttgcatacaggtgatattggatacatcgacgaagatgatgagttgttcatc 1299
||||||||| | || || |||||| |||| ||||| || || ||||||||| | |||||
Sbjct: 234 gaaggttggcttcacaccggtgatgttggttacattgatgatgatgatgagattttcata 293
Query: 1300 gttgataggttgaaggaattgatcaaatataaaggttttcaagtggctccagctgaactc 1359
||||| ||| |||||||| | ||||||| ||||| || |||||| | ||||||||||||
Sbjct: 294 gttgacagggtgaaggaactcatcaaattcaaaggcttccaagtgcccccagctgaactc 353
Query: 1360 gaagccctt 1368
|||| ||||
Sbjct: 354 gaaggcctt 362
>gnl|LJGI|FS350112 similar to UniRef100_P31687 Cluster: 4-coumarate--CoA ligase 2; n=1;
Glycine max|Rep: 4-coumarate--CoA ligase 2 - Glycine max
(Soybean), partial (36%)
Length = 630
Score = 60.0 bits (30), Expect = 5e-08
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 991 ggacagggttatgggatgacagaggcaggtccagtgttgacaatgtgttt 1040
|||||||||||||||||||||||||| || || || ||| ||||||||||
Sbjct: 381 ggacagggttatgggatgacagaggcggggccggttttgtcaatgtgttt 332
>gnl|LJGI|TC60308 similar to UniRef100_Q8S564 Cluster: 4-coumarate:coenzyme A ligase;
n=1; Glycine max|Rep: 4-coumarate:coenzyme A ligase -
Glycine max (Soybean), partial (68%)
Length = 1359
Score = 56.0 bits (28), Expect = 7e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 980 aagccaaacttggacagggttatgggatgacagaggcagg 1019
|||||||||| |||||||| ||||| ||||||||||||||
Sbjct: 1094 aagccaaactaggacagggatatggaatgacagaggcagg 1133