Miyakogusa Predicted Gene
- Lj3g3v2038710.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v2038710.1 CUFF.43468.1
(816 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60497 similar to UniRef100_Q06Z73 Cluster: Fibrillin ... 1618 0.0
gnl|LJGI|FS353068 similar to UniRef100_Q06Z73 Cluster: Fibrillin... 523 e-148
gnl|LJGI|FS326753 similar to UniRef100_Q06Z73 Cluster: Fibrillin... 502 e-141
gnl|LJGI|BP028692 similar to UniRef100_Q8W4F1 Cluster: Probable ... 297 6e-80
>gnl|LJGI|TC60497 similar to UniRef100_Q06Z73 Cluster: Fibrillin 8; n=1; Coffea
canephora|Rep: Fibrillin 8 - Coffea canephora (Robusta
coffee), partial (79%)
Length = 1141
Score = 1618 bits (816), Expect = 0.0
Identities = 816/816 (100%)
Strand = Plus / Plus
Query: 1 atggacttagctttccgttgcagttcacccttgtaccttccatcatcaccatctactact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atggacttagctttccgttgcagttcacccttgtaccttccatcatcaccatctactact 153
Query: 61 actaggaagcccagtaattgccatgtgaaatcattccccagaaaaatgtcactgtccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 actaggaagcccagtaattgccatgtgaaatcattccccagaaaaatgtcactgtccatg 213
Query: 121 gcaactgctcaggcatatgattccgagttagagaacaagaagcttcagctattgacctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 gcaactgctcaggcatatgattccgagttagagaacaagaagcttcagctattgacctct 273
Query: 181 atccaagacacacaaaggggactcctcacaactcctgatcaacgcttttcgatcgaagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 atccaagacacacaaaggggactcctcacaactcctgatcaacgcttttcgatcgaagag 333
Query: 241 gctctcgtgaatgtagagggttgcaacaagggtgaccccatcaatttgaacaagttggat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 gctctcgtgaatgtagagggttgcaacaagggtgaccccatcaatttgaacaagttggat 393
Query: 301 ggaacgtggcgcctgcaatatacttctgcttctgatgttcttgttcttttcgaagctgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggaacgtggcgcctgcaatatacttctgcttctgatgttcttgttcttttcgaagctgct 453
Query: 361 gctagacttcctttctttcaagttggacagatctttcagaaatttgaatgtcgtgatgaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 gctagacttcctttctttcaagttggacagatctttcagaaatttgaatgtcgtgatgaa 513
Query: 421 tctaatggaggtgttatccgcaatgttgtccgttggagtgttccaaatttgttagaggaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 tctaatggaggtgttatccgcaatgttgtccgttggagtgttccaaatttgttagaggaa 573
Query: 481 caagatggtgctacattgcttgtatctgccaagtttactgttgtatctgtccgtaatatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 caagatggtgctacattgcttgtatctgccaagtttactgttgtatctgtccgtaatatc 633
Query: 541 taccttcagtttcaagagatcacacttcaagatataaatattaatgaacagctacaggct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 taccttcagtttcaagagatcacacttcaagatataaatattaatgaacagctacaggct 693
Query: 601 ttaatagctccagcattgctaccccgatcttatttaagtctgcagattttacaatttctg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 ttaatagctccagcattgctaccccgatcttatttaagtctgcagattttacaatttctg 753
Query: 661 cgtgctttcaaagctcaaatcccggtgagggatccgggaaggcaatcggtaggaggacta 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 cgtgctttcaaagctcaaatcccggtgagggatccgggaaggcaatcggtaggaggacta 813
Query: 721 tattaccttagttatttggatgataacatgcttttgggtcgtgctgttggtggaggaggg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 tattaccttagttatttggatgataacatgcttttgggtcgtgctgttggtggaggaggg 873
Query: 781 gtatttgtgtttacgagagcccagtcgctctactga 816
||||||||||||||||||||||||||||||||||||
Sbjct: 874 gtatttgtgtttacgagagcccagtcgctctactga 909
>gnl|LJGI|FS353068 similar to UniRef100_Q06Z73 Cluster: Fibrillin 8; n=1; Coffea
canephora|Rep: Fibrillin 8 - Coffea canephora (Robusta
coffee), partial (32%)
Length = 777
Score = 523 bits (264), Expect = e-148
Identities = 264/264 (100%)
Strand = Plus / Minus
Query: 382 gttggacagatctttcagaaatttgaatgtcgtgatgaatctaatggaggtgttatccgc 441
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gttggacagatctttcagaaatttgaatgtcgtgatgaatctaatggaggtgttatccgc 544
Query: 442 aatgttgtccgttggagtgttccaaatttgttagaggaacaagatggtgctacattgctt 501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 aatgttgtccgttggagtgttccaaatttgttagaggaacaagatggtgctacattgctt 484
Query: 502 gtatctgccaagtttactgttgtatctgtccgtaatatctaccttcagtttcaagagatc 561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 483 gtatctgccaagtttactgttgtatctgtccgtaatatctaccttcagtttcaagagatc 424
Query: 562 acacttcaagatataaatattaatgaacagctacaggctttaatagctccagcattgcta 621
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 acacttcaagatataaatattaatgaacagctacaggctttaatagctccagcattgcta 364
Query: 622 ccccgatcttatttaagtctgcag 645
||||||||||||||||||||||||
Sbjct: 363 ccccgatcttatttaagtctgcag 340
Score = 99.6 bits (50), Expect = 3e-20
Identities = 50/50 (100%)
Strand = Plus / Minus
Query: 640 ctgcagattttacaatttctgcgtgctttcaaagctcaaatcccggtgag 689
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 50 ctgcagattttacaatttctgcgtgctttcaaagctcaaatcccggtgag 1
>gnl|LJGI|FS326753 similar to UniRef100_Q06Z73 Cluster: Fibrillin 8; n=1; Coffea
canephora|Rep: Fibrillin 8 - Coffea canephora (Robusta
coffee), partial (29%)
Length = 818
Score = 502 bits (253), Expect = e-141
Identities = 253/253 (100%)
Strand = Plus / Plus
Query: 131 aggcatatgattccgagttagagaacaagaagcttcagctattgacctctatccaagaca 190
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aggcatatgattccgagttagagaacaagaagcttcagctattgacctctatccaagaca 364
Query: 191 cacaaaggggactcctcacaactcctgatcaacgcttttcgatcgaagaggctctcgtga 250
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cacaaaggggactcctcacaactcctgatcaacgcttttcgatcgaagaggctctcgtga 424
Query: 251 atgtagagggttgcaacaagggtgaccccatcaatttgaacaagttggatggaacgtggc 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 atgtagagggttgcaacaagggtgaccccatcaatttgaacaagttggatggaacgtggc 484
Query: 311 gcctgcaatatacttctgcttctgatgttcttgttcttttcgaagctgctgctagacttc 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcctgcaatatacttctgcttctgatgttcttgttcttttcgaagctgctgctagacttc 544
Query: 371 ctttctttcaagt 383
|||||||||||||
Sbjct: 545 ctttctttcaagt 557
Score = 264 bits (133), Expect = 8e-70
Identities = 133/133 (100%)
Strand = Plus / Plus
Query: 1 atggacttagctttccgttgcagttcacccttgtaccttccatcatcaccatctactact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 88 atggacttagctttccgttgcagttcacccttgtaccttccatcatcaccatctactact 147
Query: 61 actaggaagcccagtaattgccatgtgaaatcattccccagaaaaatgtcactgtccatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 148 actaggaagcccagtaattgccatgtgaaatcattccccagaaaaatgtcactgtccatg 207
Query: 121 gcaactgctcagg 133
|||||||||||||
Sbjct: 208 gcaactgctcagg 220
>gnl|LJGI|BP028692 similar to UniRef100_Q8W4F1 Cluster: Probable
plastid-lipid-associated protein 10, chloroplast
precursor; n=1; Arabidopsis thaliana|Rep: Probable
plastid-lipid-associated protein 10, chloroplast
precursor - Arabidopsis thaliana (Mouse-ear cress),
partial (31%)
Length = 485
Score = 297 bits (150), Expect = 6e-80
Identities = 150/150 (100%)
Strand = Plus / Minus
Query: 496 ttgcttgtatctgccaagtttactgttgtatctgtccgtaatatctaccttcagtttcaa 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ttgcttgtatctgccaagtttactgttgtatctgtccgtaatatctaccttcagtttcaa 426
Query: 556 gagatcacacttcaagatataaatattaatgaacagctacaggctttaatagctccagca 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 gagatcacacttcaagatataaatattaatgaacagctacaggctttaatagctccagca 366
Query: 616 ttgctaccccgatcttatttaagtctgcag 645
||||||||||||||||||||||||||||||
Sbjct: 365 ttgctaccccgatcttatttaagtctgcag 336
Score = 232 bits (117), Expect = 3e-60
Identities = 117/117 (100%)
Strand = Plus / Minus
Query: 700 aggcaatcggtaggaggactatattaccttagttatttggatgataacatgcttttgggt 759
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 aggcaatcggtaggaggactatattaccttagttatttggatgataacatgcttttgggt 278
Query: 760 cgtgctgttggtggaggaggggtatttgtgtttacgagagcccagtcgctctactga 816
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cgtgctgttggtggaggaggggtatttgtgtttacgagagcccagtcgctctactga 221