Miyakogusa Predicted Gene
- Lj3g3v1981270.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1981270.1 tr|Q533R8|Q533R8_LOTJA MADS box protein AGL11
OS=Lotus japonicus PE=2 SV=1,93.27,0,SRF-like,Transcription factor,
MADS-box; coiled-coil,NULL; MADSDOMAIN,Transcription factor,
MADS-box,gene.g48360.t1.1
(630 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL1... 928 0.0
gnl|LJGI|TC67825 UniRef100_Q533S1 Cluster: MADS box protein AGa;... 170 7e-42
gnl|LJGI|TC75483 UniRef100_Q533S0 Cluster: MADS box protein AGb;... 127 9e-29
gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box... 121 6e-27
gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box p... 84 1e-15
gnl|LJGI|TC71124 similar to UniRef100_A1XG54 Cluster: SOC1; n=1;... 76 3e-13
gnl|LJGI|TC61471 UniRef100_Q533S4 Cluster: MADS box protein PIb;... 62 4e-09
gnl|LJGI|TC57369 similar to UniRef100_A7PQ40 Cluster: Chromosome... 56 3e-07
>gnl|LJGI|TC57459 UniRef100_Q533R8 Cluster: MADS box protein AGL11; n=1; Lotus
japonicus|Rep: MADS box protein AGL11 - Lotus japonicus,
complete
Length = 983
Score = 928 bits (468), Expect = 0.0
Identities = 468/468 (100%)
Strand = Plus / Plus
Query: 1 atggggagggggaagattgagatcaagaggattgagaacacaactaatcgccaggtgaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 atggggagggggaagattgagatcaagaggattgagaacacaactaatcgccaggtgaca 143
Query: 61 ttctgcaagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 ttctgcaagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgat 203
Query: 121 gctgaagttgccctcattgtcttctccagccgtggccgcctctatgaatattcaaacaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 gctgaagttgccctcattgtcttctccagccgtggccgcctctatgaatattcaaacaac 263
Query: 181 aacatcaggtcaactatagagaggtacaaaaaggcttgttcagatcattcaagtacgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aacatcaggtcaactatagagaggtacaaaaaggcttgttcagatcattcaagtacgagc 323
Query: 241 actaccacagaaattaatgctcagtactatcaacaagaatctgccaagctgcgacaacaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 actaccacagaaattaatgctcagtactatcaacaagaatctgccaagctgcgacaacaa 383
Query: 301 attcagatgctgcaaaattcaaacaggcacttaatgggtgatgccttaagcaccctgacg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attcagatgctgcaaaattcaaacaggcacttaatgggtgatgccttaagcaccctgacg 443
Query: 361 gtgaaggagcttaagcaacttgagaacaggcttgaaaggggaatcactagaattagatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gtgaaggagcttaagcaacttgagaacaggcttgaaaggggaatcactagaattagatcc 503
Query: 421 aagaaacatgagatgctactagctgaaattgaatacttccagaaaagg 468
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aagaaacatgagatgctactagctgaaattgaatacttccagaaaagg 551
Score = 319 bits (161), Expect = 1e-86
Identities = 161/161 (100%)
Strand = Plus / Plus
Query: 468 gataactgatgttgagaggattcagcaagtaaacatggtttctggacaagagctgaatgc 527
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 gataactgatgttgagaggattcagcaagtaaacatggtttctggacaagagctgaatgc 652
Query: 528 cattcaggcattagcttctcgtaactttttcaatccacccatgattgaagatggaacttc 587
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 cattcaggcattagcttctcgtaactttttcaatccacccatgattgaagatggaacttc 712
Query: 588 ctaccctcagcagcctgataagaagatccttcatcttgggt 628
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 ctaccctcagcagcctgataagaagatccttcatcttgggt 753
>gnl|LJGI|TC67825 UniRef100_Q533S1 Cluster: MADS box protein AGa; n=1; Lotus
japonicus|Rep: MADS box protein AGa - Lotus japonicus,
complete
Length = 1152
Score = 170 bits (86), Expect = 7e-42
Identities = 149/170 (87%)
Strand = Plus / Plus
Query: 2 tggggagggggaagattgagatcaagaggattgagaacacaactaatcgccaggtgacat 61
|||| ||||||||||||||||||||||||||||||||||| || |||||||| || || |
Sbjct: 75 tgggaagggggaagattgagatcaagaggattgagaacaccaccaatcgccaagtcactt 134
Query: 62 tctgcaagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgatg 121
|||||||| | ||||| || ||||| |||||||||||||||||||| ||||| |||||||
Sbjct: 135 tctgcaagcgcagaaatggccttcttaagaaagcttatgagctatctgtgctttgtgatg 194
Query: 122 ctgaagttgccctcattgtcttctccagccgtggccgcctctatgaatat 171
| || ||||| | ||||||||||| ||||| || |||||||||||||||
Sbjct: 195 cagaggttgctttgattgtcttctctagccgcggtcgcctctatgaatat 244
>gnl|LJGI|TC75483 UniRef100_Q533S0 Cluster: MADS box protein AGb; n=1; Lotus
japonicus|Rep: MADS box protein AGb - Lotus japonicus,
complete
Length = 960
Score = 127 bits (64), Expect = 9e-29
Identities = 145/172 (84%)
Strand = Plus / Plus
Query: 10 gggaagattgagatcaagaggattgagaacacaactaatcgccaggtgacattctgcaag 69
||||| || ||||||||| |||||||||||||||| |||||||| || || ||||||||
Sbjct: 7 gggaaaatggagatcaagcggattgagaacacaaccaatcgccaagtaaccttctgcaaa 66
Query: 70 agaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctgaagtt 129
| ||||| ||| | || ||||| || |||||| |||| ||||| |||||||| |||||
Sbjct: 67 cgcagaaatgggttgcttaagaaggcatatgagttatctgtgctttgtgatgcagaagtg 126
Query: 130 gccctcattgtcttctccagccgtggccgcctctatgaatattcaaacaaca 181
|| ||||| |||||||| | |||||||||||||||||||||| |||| ||||
Sbjct: 127 gctctcatagtcttctcaaaccgtggccgcctctatgaatatgcaaataaca 178
>gnl|LJGI|TC65119 homologue to UniRef100_Q533R9 Cluster: MADS box protein AGL1; n=1;
Lotus japonicus|Rep: MADS box protein AGL1 - Lotus
japonicus, complete
Length = 1053
Score = 121 bits (61), Expect = 6e-27
Identities = 142/169 (84%)
Strand = Plus / Plus
Query: 13 aagattgagatcaagaggattgagaacacaactaatcgccaggtgacattctgcaagaga 72
||||| ||||||||| |||| |||||||| || ||| | || || || ||||||||| |
Sbjct: 105 aagatggagatcaagcggatcgagaacaccacaaataggcaagtcaccttctgcaagcgc 164
Query: 73 agaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctgaagttgcc 132
| ||||| | |||||| |||||||||||||||| || ||||||||||||||||||||
Sbjct: 165 cgcaacggtttgctgaaggaagcttatgagctatctgttctgtgtgatgctgaagttgct 224
Query: 133 ctcattgtcttctccagccgtggccgcctctatgaatattcaaacaaca 181
|||||||||||||| |||||||||||| | ||||| ||| | |||||||
Sbjct: 225 ctcattgtcttctcaagccgtggccgcttgtatgagtatgccaacaaca 273
>gnl|LJGI|TC75219 similar to UniRef100_Q56NI4 Cluster: MADS box protein M6; n=1;
Pisum sativum|Rep: MADS box protein M6 - Pisum sativum
(Garden pea), complete
Length = 1276
Score = 83.8 bits (42), Expect = 1e-15
Identities = 72/82 (87%)
Strand = Plus / Plus
Query: 67 aagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctgaa 126
||||| ||||| |||||||| ||||||||||||||||| || || || |||||||||||
Sbjct: 376 aagaggagaaatgggcttctcaagaaagcttatgagctttctgttctctgtgatgctgag 435
Query: 127 gttgccctcattgtcttctcca 148
||||| || |||||||||||||
Sbjct: 436 gttgctcttattgtcttctcca 457
>gnl|LJGI|TC71124 similar to UniRef100_A1XG54 Cluster: SOC1; n=1; Glycine max|Rep:
SOC1 - Glycine max (Soybean), partial (71%)
Length = 1108
Score = 75.8 bits (38), Expect = 3e-13
Identities = 74/86 (86%)
Strand = Plus / Plus
Query: 61 ttctgcaagagaagaaacgggcttctgaagaaagcttatgagctatcagtgctgtgtgat 120
|||| |||||||||||| || || || ||||| |||| |||||| |||||||||||||||
Sbjct: 278 ttctccaagagaagaaatggactccttaagaaggcttttgagctctcagtgctgtgtgat 337
Query: 121 gctgaagttgccctcattgtcttctc 146
|||||||| || ||||| |||||||
Sbjct: 338 gctgaagtcgcactcatcatcttctc 363
>gnl|LJGI|TC61471 UniRef100_Q533S4 Cluster: MADS box protein PIb; n=1; Lotus
japonicus|Rep: MADS box protein PIb - Lotus japonicus,
complete
Length = 841
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 1 atggggagggggaagattgagatcaagaggattgagaac 39
|||||||| || |||||||||||||||||||||||||||
Sbjct: 87 atggggagaggtaagattgagatcaagaggattgagaac 125
>gnl|LJGI|TC57369 similar to UniRef100_A7PQ40 Cluster: Chromosome chr18 scaffold_24,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_24, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (76%)
Length = 933
Score = 56.0 bits (28), Expect = 3e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 79 gggcttctgaagaaagcttatgagctatcagtgctgtgtgatgctgaa 126
|||||||||||||| ||| | ||||| || ||||||||||||||||||
Sbjct: 249 gggcttctgaagaaggctaaggagctttctgtgctgtgtgatgctgaa 296