Miyakogusa Predicted Gene

Lj3g3v1970100.3
Show Alignment:  
BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1970100.3 tr|G7JQL8|G7JQL8_MEDTR Isochorismate synthase
OS=Medicago truncatula GN=MTR_4g076520 PE=4
SV=1,83.27,0,Chorismate_bind,Chorismate binding, C-terminal; seg,NULL;
ISOCHORISMATE SYNTHASE,Isochorismate synth,CUFF.43380.3
         (1758 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP049139 similar to UniRef100_A9LS51 Cluster: Isochoris...   392   e-108

>gnl|LJGI|BP049139 similar to UniRef100_A9LS51 Cluster: Isochorismate synthase; n=1;
            Nicotiana benthamiana|Rep: Isochorismate synthase -
            Nicotiana benthamiana, partial (16%)
          Length = 477

 Score =  392 bits (198), Expect = e-108
 Identities = 204/207 (98%)
 Strand = Plus / Minus

                                                                        
Query: 1552 cgagggatgtacgctggacctgttggttggtttggtggaggagagagtgagtttgctgtt 1611
            ||||||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||
Sbjct: 477  cgagggatgtacgctggacctgttgnttgntttgntggaggagagagtgagtttgctgtt 418

                                                                        
Query: 1612 ggcatcaggtcagcattggtggaaaaggatctaggtgcactgatatatgctggaacaggg 1671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417  ggcatcaggtcagcattggtggaaaaggatctaggtgcactgatatatgctggaacaggg 358

                                                                        
Query: 1672 atagtggaaggaagcaaaccttacctggagtgggatgagctagagctcaaaacatctcag 1731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357  atagtggaaggaagcaaaccttacctggagtgggatgagctagagctcaaaacatctcag 298

                                       
Query: 1732 tttaccaagttgctcaaacttgacttg 1758
            |||||||||||||||||||||||||||
Sbjct: 297  tttaccaagttgctcaaacttgacttg 271