Miyakogusa Predicted Gene
- Lj3g3v1957980.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1957980.1 Non Chatacterized Hit- tr|A8Q603|A8Q603_BRUMA
Putative LAG1-interacting protein OS=Brugia malayi GN=,28.96,3e-19,no
description,Zinc finger, RING/FYVE/PHD-type; ZF_RING_1,Zinc finger,
RING-type, conserved site; SU,CUFF.43438.1
(570 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59864 similar to UniRef100_A7QLW2 Cluster: Chromosome... 1102 0.0
gnl|LJGI|GO021326 similar to UniRef100_A7QLW2 Cluster: Chromosom... 595 e-169
>gnl|LJGI|TC59864 similar to UniRef100_A7QLW2 Cluster: Chromosome chr18 scaffold_122,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_122, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (75%)
Length = 828
Score = 1102 bits (556), Expect = 0.0
Identities = 567/570 (99%), Gaps = 3/570 (0%)
Strand = Plus / Plus
Query: 1 atggagcgggaaggtcctccattgaacgatctctgctcagtgtgccatggaaacttccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 atggagcgggaaggtcctccattgaacgatctctgctcagtgtgccatggaaacttccac 113
Query: 61 attccatgccaagcaaattgctctcactggttctgcgccaactgcatcatgctggtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 attccatgccaagcaaattgctctcactggttctgcgccaactgcatcatgctggtgtgg 173
Query: 121 aaccatggatctgcgattcaaccatgcaaatgccccctctgtcgccgccccattacgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 aaccatggatctgcgattcaaccatgcaaatgccccctctgtcgccgccccattacgctc 233
Query: 181 ctggttcctaccgaacaagactccgcgtcgcaccgccaggaacctgaagtcgctcacgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 ctggttcctaccgaacaagactccgcgtcgcaccgccaggaacctgaagtcgctcacgtt 293
Query: 241 ctctcccaaattcaaacctacaatcgcttcttcggtgcccgttcctctggtccccttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ctctcccaaattcaaacctacaatcgcttcttcggtgcccgttcctctggtccccttcaa 353
Query: 301 agaatgctggatctcccttttctgctgcgaaggcttgctcgggaattcttggaccctcag 360
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 agaatgctggatctccc---tctgctgcgaaggcttgctcgggaattcttggaccctcag 410
Query: 361 agatcacttcctcttgtcatcagagctcgtgtttatattgcaatgataataagtgctata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 agatcacttcctcttgtcatcagagctcgtgtttatattgcaatgataataagtgctata 470
Query: 421 tacgtctttagccccattgacatcattcctgaagggatatggggagtagttggtctcctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 tacgtctttagccccattgacatcattcctgaagggatatggggagtagttggtctcctg 530
Query: 481 gatgatctccttattgtgctcatcttcttcttgcatgttgctgccctttatagatcagtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gatgatctccttattgtgctcatcttcttcttgcatgttgctgccctttatagatcagtg 590
Query: 541 ctttaccgccgtcatggtggttcctgaact 570
||||||||||||||||||||||||||||||
Sbjct: 591 ctttaccgccgtcatggtggttcctgaact 620
>gnl|LJGI|GO021326 similar to UniRef100_A7QLW2 Cluster: Chromosome chr18 scaffold_122,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_122, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (73%)
Length = 777
Score = 595 bits (300), Expect = e-169
Identities = 300/300 (100%)
Strand = Plus / Plus
Query: 1 atggagcgggaaggtcctccattgaacgatctctgctcagtgtgccatggaaacttccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atggagcgggaaggtcctccattgaacgatctctgctcagtgtgccatggaaacttccac 120
Query: 61 attccatgccaagcaaattgctctcactggttctgcgccaactgcatcatgctggtgtgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 attccatgccaagcaaattgctctcactggttctgcgccaactgcatcatgctggtgtgg 180
Query: 121 aaccatggatctgcgattcaaccatgcaaatgccccctctgtcgccgccccattacgctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaccatggatctgcgattcaaccatgcaaatgccccctctgtcgccgccccattacgctc 240
Query: 181 ctggttcctaccgaacaagactccgcgtcgcaccgccaggaacctgaagtcgctcacgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ctggttcctaccgaacaagactccgcgtcgcaccgccaggaacctgaagtcgctcacgtt 300
Query: 241 ctctcccaaattcaaacctacaatcgcttcttcggtgcccgttcctctggtccccttcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 ctctcccaaattcaaacctacaatcgcttcttcggtgcccgttcctctggtccccttcaa 360
Score = 464 bits (234), Expect = e-130
Identities = 237/238 (99%)
Strand = Plus / Plus
Query: 333 gcttgctcgggaattcttggaccctcagagatcacttcctcttgtcatcagagctcgtgt 392
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gcttgctcgggaattcttggaccctcagagatcacttcctcttgtcatcagagctcgtgt 420
Query: 393 ttatattgcaatgataataagtgctatatacgtctttagccccattgacatcattcctga 452
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 ttatattgcaatgataataagtgctatatacgtctttagccccattgacatcattcctga 480
Query: 453 agggatatggggagtagttggtctcctggatgatctccttattgtgctcatcttcttctt 512
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 agggatatggggagtagttggtctcctggatgatctccttattgtgctcatcttcttctt 540
Query: 513 gcatgttgctgccctttatagatcagtgctttaccgccgtcatggtggttcctgaact 570
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 gcatgttactgccctttatagatcagtgctttaccgccgtcatggtggttcctgaact 598