Miyakogusa Predicted Gene
- Lj3g3v1953290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1953290.1 tr|G7J0G1|G7J0G1_MEDTR KH domain-containing
protein OS=Medicago truncatula GN=MTR_3g010220 PE=4
SV=1,84.01,0,RNA-BINDING PROTEIN RELATED,NULL; no description,NULL; K
homology RNA-binding domain,K Homology doma,CUFF.43344.1
(885 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79456 similar to UniRef100_A7Q9F3 Cluster: Chromosome... 1739 0.0
gnl|LJGI|TC72657 similar to UniRef100_Q0DY06 Cluster: Os02g07227... 898 0.0
gnl|LJGI|BP063968 62 6e-09
>gnl|LJGI|TC79456 similar to UniRef100_A7Q9F3 Cluster: Chromosome chr19 scaffold_66,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr19 scaffold_66, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1444
Score = 1739 bits (877), Expect = 0.0
Identities = 883/885 (99%)
Strand = Plus / Plus
Query: 1 atgatgtcttcctccggcgccggcaggtacatggccttcccgccgtcaccgtcagctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 atgatgtcttcctccggcgccggcaggtacatggccttcccgccgtcaccgtcagctcct 115
Query: 61 ccatcccctcacctctccggtcttcgttctgctgcctcctctgctcttgctgaacaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 ccatcccctcacctctccggtcttcgttctgctgcctcctctgctcttgctgaacaggac 175
Query: 121 aagtatttaactgagttattgggagaacgtcatattcttggtcccttcatggctgtactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 aagtatttaactgagttattgggagaacgtcatattcttggtcccttcatggctgtactt 235
Query: 181 ccacactgctatcgattgatcaatcaagaaattttgcgtgtaaccacgctgttggggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ccacactgctatcgattgatcaatcaagaaattttgcgtgtaaccacgctgttggggaat 295
Query: 241 gcatcagttttaggtcaaagtaggcttgaacatgcgagccccctggctactggaggaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 gcatcagttttaggtcaaagtaggcttgaacatgcgagccccctggctactggaggaata 355
Query: 301 ttttcaaatggaggtgcagatgtgaacggttgggcatcaagatttcaatcagaaatgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttttcaaatggaggtgcagatgtgaacggttgggcatcaagatttcaatcagaaatgcca 415
Query: 361 agtttgttacagtcctcggcaacaccaagttggctgagtccacaaggtagctcatccggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 agtttgttacagtcctcggcaacaccaagttggctgagtccacaaggtagctcatccggt 475
Query: 421 cttgttgttaaaaagactatgagagtcgacatacctgtggaagtatatcctaattttaac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 cttgttgttaaaaagactatgagagtcgacatacctgtggaagtatatcctaattttaac 535
Query: 481 tttgttggtcgcctcctaggccctagaggaaactctctaaagcgcgtagaagcaagtact 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 tttgttggtcgcctcctaggccctagaggaaactctctaaagcgcgtagaagcaagtact 595
Query: 541 gattgtcgtgtcttgatcaggggccgaggtagcataaaggatccagctaaggaggaaatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gattgtcgtgtcttgatcaggggccgaggtagcataaaggatccagctaaggaggaaatg 655
Query: 601 atgagagggaaacctgggtatgagcatctgaatgaacctctccatgttctagttgaagca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 atgagagggaaacctgggtatgagcatctgaatgaacctctccatgttctagttgaagca 715
Query: 661 gaatttccagctgaaatcatagatgcccgcttgatgcaagcacgtgaaatacttgaagat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gaatttccagctgaaatcatagatgcccgcttgatgcaagcacgtgaaatacttgaagat 775
Query: 721 ttgcttaaacctgtggacgaatctcaggactactacaagaagcagcagcttcgggaacta 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 ttgcttaaacctgtggacgaatctcaggactactacaagaagcagcagcttcgggaacta 835
Query: 781 gcactgctcaatggcactcttcgcgaggagggttctcctatgtctggttctgtttcaccc 840
|||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 836 gcactgctcaatggcactgttggcgaggagggttctcctatgtctggttctgtttcaccc 895
Query: 841 tttcacaacagccttggtatgaaaagggccaagaccagggggtaa 885
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 tttcacaacagccttggtatgaaaagggccaagaccagggggtaa 940
>gnl|LJGI|TC72657 similar to UniRef100_Q0DY06 Cluster: Os02g0722700 protein; n=1;
Oryza sativa Japonica Group|Rep: Os02g0722700 protein -
Oryza sativa subsp. japonica (Rice), partial (42%)
Length = 599
Score = 898 bits (453), Expect = 0.0
Identities = 453/453 (100%)
Strand = Plus / Plus
Query: 1 atgatgtcttcctccggcgccggcaggtacatggccttcccgccgtcaccgtcagctcct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 atgatgtcttcctccggcgccggcaggtacatggccttcccgccgtcaccgtcagctcct 206
Query: 61 ccatcccctcacctctccggtcttcgttctgctgcctcctctgctcttgctgaacaggac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 ccatcccctcacctctccggtcttcgttctgctgcctcctctgctcttgctgaacaggac 266
Query: 121 aagtatttaactgagttattgggagaacgtcatattcttggtcccttcatggctgtactt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 aagtatttaactgagttattgggagaacgtcatattcttggtcccttcatggctgtactt 326
Query: 181 ccacactgctatcgattgatcaatcaagaaattttgcgtgtaaccacgctgttggggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccacactgctatcgattgatcaatcaagaaattttgcgtgtaaccacgctgttggggaat 386
Query: 241 gcatcagttttaggtcaaagtaggcttgaacatgcgagccccctggctactggaggaata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gcatcagttttaggtcaaagtaggcttgaacatgcgagccccctggctactggaggaata 446
Query: 301 ttttcaaatggaggtgcagatgtgaacggttgggcatcaagatttcaatcagaaatgcca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttttcaaatggaggtgcagatgtgaacggttgggcatcaagatttcaatcagaaatgcca 506
Query: 361 agtttgttacagtcctcggcaacaccaagttggctgagtccacaaggtagctcatccggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 agtttgttacagtcctcggcaacaccaagttggctgagtccacaaggtagctcatccggt 566
Query: 421 cttgttgttaaaaagactatgagagtcgacata 453
|||||||||||||||||||||||||||||||||
Sbjct: 567 cttgttgttaaaaagactatgagagtcgacata 599
>gnl|LJGI|BP063968
Length = 461
Score = 61.9 bits (31), Expect = 6e-09
Identities = 45/47 (95%), Gaps = 2/47 (4%)
Strand = Plus / Plus
Query: 162 tcccttcatggctgtacttccacactgctatcgattgatcaatcaag 208
||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 1 tcccttcatggctgtacttccacac-gctatcga-tgatcaatcaag 45