Miyakogusa Predicted Gene

Lj3g3v1943270.4
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1943270.4 Non Chatacterized Hit- tr|K3YQX3|K3YQX3_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si016667,43.48,2e-19,SEC14 CYTOSOLIC FACTOR-RELATED,NULL; SEC14
RELATED PROTEIN,NULL,CUFF.43337.4
         (516 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC76925 similar to UniRef100_A7Q9E7 Cluster: Chromosome...   276   1e-73

>gnl|LJGI|TC76925 similar to UniRef100_A7Q9E7 Cluster: Chromosome chr19 scaffold_66,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_66, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (5%)
          Length = 513

 Score =  276 bits (139), Expect = 1e-73
 Identities = 151/155 (97%)
 Strand = Plus / Plus

                                                                       
Query: 362 taatggattccatggataggatcaaatctgttgaatttgaccttgaaaaaacaaagcggg 421
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1   taatggattccatggataggatcaaatctgttgaatttgaccttgaaaaaaccaagcggg 60

                                                                       
Query: 422 tattgcattctgcagtgaagcagcagcttgagattgctgacttggtggagaacttgcaga 481
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  tattgcattctgcagttaagcagcagcttgagattgctgacttggtggagaacttgcaga 120

                                              
Query: 482 aatcaaactgtcgacaaagaaggctattctgttga 516
           |||| |||||||||| |||||||||||||||||||
Sbjct: 121 aatccaactgtcgaccaagaaggctattctgttga 155