Miyakogusa Predicted Gene
- Lj3g3v1933120.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1933120.1 CUFF.43372.1
(489 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78171 homologue to UniRef100_Q646H3 Cluster: Chloropl... 969 0.0
gnl|LJGI|TC61302 homologue to UniRef100_A7QQE7 Cluster: Chromoso... 969 0.0
>gnl|LJGI|TC78171 homologue to UniRef100_Q646H3 Cluster: Chloroplast photosystem I
reaction center V; n=1; Camellia sinensis|Rep:
Chloroplast photosystem I reaction center V - Camellia
sinensis (Tea), partial (77%)
Length = 863
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 1 atggcagcctctgcttcatccatgatatcagctcctgccttatcacccaccatccaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 atggcagcctctgcttcatccatgatatcagctcctgccttatcacccaccatccaaaag 173
Query: 61 tcccaaacccatctcctgaagccatccaacgtgaccttccagggtctcagacccctcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 tcccaaacccatctcctgaagccatccaacgtgaccttccagggtctcagacccctcaca 233
Query: 121 aggtccaaagttagcaccctttccacccccaacaaaagggtctctcgtggatttgttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 234 aggtccaaagttagcaccctttccacccccaacaaaagggtctctcgtggatttgttgtc 293
Query: 181 aaagcagagctcaacacttctctggtgataagcctcagcactggtctttctctgttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 aaagcagagctcaacacttctctggtgataagcctcagcactggtctttctctgttcttg 353
Query: 241 ggcaggtttgtgttcttcaacttccagagggagaacgtggccaaacaaggtttacctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 ggcaggtttgtgttcttcaacttccagagggagaacgtggccaaacaaggtttacctgag 413
Query: 301 cagaatggactcacacactttgaagctggtgacacacgtgccaaggagtacgtgagtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cagaatggactcacacactttgaagctggtgacacacgtgccaaggagtacgtgagtctc 473
Query: 361 ctgaaatccaatgaccctgttgggttcaacattgttgatgtcttggcttggggttccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 ctgaaatccaatgaccctgttgggttcaacattgttgatgtcttggcttggggttccatt 533
Query: 421 ggtcacattgttgcttactatatcttggccactgctagcaatggctatgacccttccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 ggtcacattgttgcttactatatcttggccactgctagcaatggctatgacccttccttc 593
Query: 481 tttggttga 489
|||||||||
Sbjct: 594 tttggttga 602
>gnl|LJGI|TC61302 homologue to UniRef100_A7QQE7 Cluster: Chromosome undetermined
scaffold_142, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_142,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (68%)
Length = 778
Score = 969 bits (489), Expect = 0.0
Identities = 489/489 (100%)
Strand = Plus / Plus
Query: 1 atggcagcctctgcttcatccatgatatcagctcctgccttatcacccaccatccaaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 64 atggcagcctctgcttcatccatgatatcagctcctgccttatcacccaccatccaaaag 123
Query: 61 tcccaaacccatctcctgaagccatccaacgtgaccttccagggtctcagacccctcaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 tcccaaacccatctcctgaagccatccaacgtgaccttccagggtctcagacccctcaca 183
Query: 121 aggtccaaagttagcaccctttccacccccaacaaaagggtctctcgtggatttgttgtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 184 aggtccaaagttagcaccctttccacccccaacaaaagggtctctcgtggatttgttgtc 243
Query: 181 aaagcagagctcaacacttctctggtgataagcctcagcactggtctttctctgttcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 aaagcagagctcaacacttctctggtgataagcctcagcactggtctttctctgttcttg 303
Query: 241 ggcaggtttgtgttcttcaacttccagagggagaacgtggccaaacaaggtttacctgag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ggcaggtttgtgttcttcaacttccagagggagaacgtggccaaacaaggtttacctgag 363
Query: 301 cagaatggactcacacactttgaagctggtgacacacgtgccaaggagtacgtgagtctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 cagaatggactcacacactttgaagctggtgacacacgtgccaaggagtacgtgagtctc 423
Query: 361 ctgaaatccaatgaccctgttgggttcaacattgttgatgtcttggcttggggttccatt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 ctgaaatccaatgaccctgttgggttcaacattgttgatgtcttggcttggggttccatt 483
Query: 421 ggtcacattgttgcttactatatcttggccactgctagcaatggctatgacccttccttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ggtcacattgttgcttactatatcttggccactgctagcaatggctatgacccttccttc 543
Query: 481 tttggttga 489
|||||||||
Sbjct: 544 tttggttga 552