Miyakogusa Predicted Gene
- Lj3g3v1906600.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1906600.1 Non Chatacterized Hit- tr|I0Z603|I0Z603_9CHLO
Uncharacterized protein OS=Coccomyxa subellipsoidea
C-,40.57,3e-18,NADH-UBIQUINONE OXIDOREDUCTASE B14 SUBUNIT,NULL;
Complex1_LYR_2,NULL,CUFF.43285.1
(405 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC61699 weakly similar to UniRef100_Q9LHI0 Cluster: Ara... 803 0.0
gnl|LJGI|GO022097 similar to UniRef100_Q9LHI0 Cluster: Arabidops... 436 e-122
>gnl|LJGI|TC61699 weakly similar to UniRef100_Q9LHI0 Cluster: Arabidopsis thaliana
genomic DNA, chromosome 3, P1 clone: MQC3; n=1;
Arabidopsis thaliana|Rep: Arabidopsis thaliana genomic
DNA, chromosome 3, P1 clone: MQC3 - Arabidopsis thaliana
(Mouse-ear cress), partial (75%)
Length = 719
Score = 803 bits (405), Expect = 0.0
Identities = 405/405 (100%)
Strand = Plus / Plus
Query: 1 atgtcgaacctgcttcgaagcgtgagggtgcctccgaactcagtgagtttagaggaagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105 atgtcgaacctgcttcgaagcgtgagggtgcctccgaactcagtgagtttagaggaagcg 164
Query: 61 cgtcaccgagtgttcgatttcttcagaatagcttgcagatcgttgccctccgtcatggaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165 cgtcaccgagtgttcgatttcttcagaatagcttgcagatcgttgccctccgtcatggaa 224
Query: 121 acttataacctctacgacgtcgcttccgtctcccagcttcgctccaccgtcgcctccgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 225 acttataacctctacgacgtcgcttccgtctcccagcttcgctccaccgtcgcctccgag 284
Query: 181 atccgcaagaacacccacgtcacggatcccaaggtgattgatatgctgcttttcaaggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 atccgcaagaacacccacgtcacggatcccaaggtgattgatatgctgcttttcaaggca 344
Query: 241 acggaagagctgaaggacattgttgaccatgcaaagcagaggcatcatgttgttggtcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 acggaagagctgaaggacattgttgaccatgcaaagcagaggcatcatgttgttggtcag 404
Query: 301 tacgtggttggtcggcacaagcttgagcagcaggagttgggctcgaagggccagaccatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 tacgtggttggtcggcacaagcttgagcagcaggagttgggctcgaagggccagaccatc 464
Query: 361 tctccttttctgcagaatttctacaagaccaattacttttgaaat 405
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 tctccttttctgcagaatttctacaagaccaattacttttgaaat 509
>gnl|LJGI|GO022097 similar to UniRef100_Q9LHI0 Cluster: Arabidopsis thaliana genomic
DNA, chromosome 3, P1 clone: MQC3; n=1; Arabidopsis
thaliana|Rep: Arabidopsis thaliana genomic DNA,
chromosome 3, P1 clone: MQC3 - Arabidopsis thaliana
(Mouse-ear cress), partial (31%)
Length = 499
Score = 436 bits (220), Expect = e-122
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 186 caagaacacccacgtcacggatcccaaggtgattgatatgctgcttttcaaggcaacgga 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 56 caagaacacccacgtcacggatcccaaggtgattgatatgctgcttttcaaggcaacgga 115
Query: 246 agagctgaaggacattgttgaccatgcaaagcagaggcatcatgttgttggtcagtacgt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 agagctgaaggacattgttgaccatgcaaagcagaggcatcatgttgttggtcagtacgt 175
Query: 306 ggttggtcggcacaagcttgagcagcaggagttgggctcgaagggccagaccatctctcc 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 ggttggtcggcacaagcttgagcagcaggagttgggctcgaagggccagaccatctctcc 235
Query: 366 ttttctgcagaatttctacaagaccaattacttttgaaat 405
||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 ttttctgcagaatttctacaagaccaattacttttgaaat 275