Miyakogusa Predicted Gene
- Lj3g3v1906530.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1906530.1 Non Chatacterized Hit- tr|A5BP73|A5BP73_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,67.83,0,SUBFAMILY NOT NAMED,NULL; CELL DIVISION CYCLE 20 (CDC20)
(FIZZY)-RELATED,NULL; no description,WD40/Y,CUFF.43284.1
(1317 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70533 homologue to UniRef100_A7QN78 Cluster: Chromoso... 200 2e-50
gnl|LJGI|TC75335 homologue to UniRef100_A7QN78 Cluster: Chromoso... 186 2e-46
gnl|LJGI|TC67165 similar to UniRef100_A7PBF4 Cluster: Chromosome... 94 3e-18
gnl|LJGI|TC71885 similar to UniRef100_A7PBF4 Cluster: Chromosome... 78 2e-13
>gnl|LJGI|TC70533 homologue to UniRef100_A7QN78 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(18%)
Length = 554
Score = 200 bits (101), Expect = 2e-50
Identities = 179/205 (87%)
Strand = Plus / Plus
Query: 1054 ctttggagcacgaatgatcgtgagttgcttagctcgcattgtatccccaacaaccagctc 1113
|||||||||| || ||| || ||||||||||||||||| || || || | |||||||||
Sbjct: 14 ctttggagcaagagtgagcgagagttgcttagctcgcacggtttcacccagaaccagctc 73
Query: 1114 accctctgggaatatccttccatggtgaagatggcagagctcaacggtcatacatccagt 1173
|| |||||| |||| ||||| ||| ||||||||||||||||||| |||||||| |||||
Sbjct: 74 actctctggaaatacccttctatgctgaagatggcagagctcaatggtcatacctccagg 133
Query: 1174 gtgctctcgatggctcaaagtccagatgggtgtactgtggcctctgcagcagctgatgag 1233
||||| | |||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 gtgctgtacatggctcagagtccagatgggtgtactgtggcctctgcagcagctgatgag 193
Query: 1234 tcacttcaattttggaatgtctttg 1258
| |||| ||| |||||||||||||
Sbjct: 194 actcttcgattctggaatgtctttg 218
>gnl|LJGI|TC75335 homologue to UniRef100_A7QN78 Cluster: Chromosome undetermined
scaffold_131, whole genome shotgun sequence; n=2; Vitis
vinifera|Rep: Chromosome undetermined scaffold_131, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(22%)
Length = 657
Score = 186 bits (94), Expect = 2e-46
Identities = 217/258 (84%)
Strand = Plus / Plus
Query: 1001 atacgggtgcatgcttgcaaactgtagacactggctcaccggtgtccgctctcctttgga 1060
|||| |||||||||||| | ||| | |||||||||| | ||||| || || |||||||
Sbjct: 6 atactggtgcatgcttgaacactatcaacactggctctcaggtgtgtgcccttctttgga 65
Query: 1061 gcacgaatgatcgtgagttgcttagctcgcattgtatccccaacaaccagctcaccctct 1120
||| || ||| || ||||||||||||||||| || || || | ||||||||||| ||||
Sbjct: 66 gcaagagtgagcgggagttgcttagctcgcacggtttcacccagaaccagctcactctct 125
Query: 1121 gggaatatccttccatggtgaagatggcagagctcaacggtcatacatccagtgtgctct 1180
|| |||| ||||| ||| ||||||||||||||||||| || ||||| ||||| |||||
Sbjct: 126 ggaaatacccttctatgctgaagatggcagagctcaatggacatacctccagggtgctgc 185
Query: 1181 cgatggctcaaagtccagatgggtgtactgtggcctctgcagcagctgatgagtcacttc 1240
|||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct: 186 acatggctcagagtccagatgggtgtactgtggcctctgcagcagctgatgagactcttc 245
Query: 1241 aattttggaatgtctttg 1258
||| |||||||| ||||
Sbjct: 246 gattctggaatgtttttg 263
>gnl|LJGI|TC67165 similar to UniRef100_A7PBF4 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (29%)
Length = 723
Score = 93.7 bits (47), Expect = 3e-18
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 46 gaaaatttggacaggttcattccgaacaggtcagccatggacttcgattatgctcactac 105
||||| ||||||||||| ||||||||||||||||||||||| ||| ||| |||||||||
Sbjct: 344 gaaaacttggacaggtttattccgaacaggtcagccatggatttcagttacgctcactac 403
Query: 106 atgctgacgga 116
|||||||||||
Sbjct: 404 atgctgacgga 414
Score = 58.0 bits (29), Expect = 1e-07
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 360 attggatgcccctgatatagtcaatgacttcaacttgaacttgcttgactggggttgctg 419
|||||||||||||||||||| |||||||| ||||||| | |||||||||||| || |
Sbjct: 640 attggatgcccctgatatagaagatgacttctacttgaatctacttgactggggtagcag 699
Query: 420 tgatgtgct 428
| |||||||
Sbjct: 700 taatgtgct 708
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 210 catgaatcggacccgaatcttggcgttcaagaacaagcc 248
|||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 496 catgaaccggacgcgaatcttggccttcaagaacaagcc 534
>gnl|LJGI|TC71885 similar to UniRef100_A7PBF4 Cluster: Chromosome chr16 scaffold_10,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr16 scaffold_10, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 756
Score = 77.8 bits (39), Expect = 2e-13
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 46 gaaaatttggacaggttcattccgaacaggtcagccatggacttcgattatgctcactac 105
||||| ||||| ||||| |||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 316 gaaaacttggataggtttattccgaataggtcagccatggacttcagttacgctcactac 375
Query: 106 atgctgacgga 116
||||| |||||
Sbjct: 376 atgctcacgga 386
Score = 61.9 bits (31), Expect = 9e-09
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 362 tggatgcccctgatatagtcaatgacttcaacttgaacttgcttgactggggttgctgtg 421
|||||||||||||||| | |||||||| ||||||| ||||||||||||||| || ||
Sbjct: 611 tggatgcccctgatattgcagatgacttctacttgaatttgcttgactggggtagcagta 670
Query: 422 atgtgct 428
|||||||
Sbjct: 671 atgtgct 677
Score = 54.0 bits (27), Expect = 2e-06
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 210 catgaatcggacccgaatcttggcgttcaagaacaagcc 248
|||||| ||||| ||||||||||| ||||||||||||||
Sbjct: 468 catgaaccggacgcgaatcttggccttcaagaacaagcc 506