Miyakogusa Predicted Gene
- Lj3g3v1896450.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1896450.1 Non Chatacterized Hit- tr|I1M0N0|I1M0N0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55983 PE,88.62,0,no
description,NULL; RNase_T,Exonuclease, RNase T/DNA polymerase III;
zf-GRF,Zinc finger, GRF-type; ,CUFF.43408.1
(1236 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC58788 homologue to UniRef100_A7QMC1 Cluster: Chromoso... 1316 0.0
gnl|LJGI|FS325602 homologue to UniRef100_A7QMC1 Cluster: Chromos... 1304 0.0
gnl|LJGI|TC59896 similar to UniRef100_A7QMC1 Cluster: Chromosome... 597 e-170
>gnl|LJGI|TC58788 homologue to UniRef100_A7QMC1 Cluster: Chromosome undetermined
scaffold_125, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_125,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 761
Score = 1316 bits (664), Expect = 0.0
Identities = 664/664 (100%)
Strand = Plus / Plus
Query: 1 atgatggcccttgaaaattcagaaaatatgcaaataacctgcgaggcatctctgaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 98 atgatggcccttgaaaattcagaaaatatgcaaataacctgcgaggcatctctgaaatgc 157
Query: 61 ctccagggaaagggattccctagcacttttcagtgtaatgggagttctattacagagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 158 ctccagggaaagggattccctagcacttttcagtgtaatgggagttctattacagagcta 217
Query: 121 aaaaatgatcctggtactcatccagctggggatgtttctgaacctaaccgccgtcttggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aaaaatgatcctggtactcatccagctggggatgtttctgaacctaaccgccgtcttggc 277
Query: 181 agtgagtttctggagccttccaatgaatttcacagtaaacctacttatcaccatgagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 278 agtgagtttctggagccttccaatgaatttcacagtaaacctacttatcaccatgagtac 337
Query: 241 aacacctggacatcctgccattttcactctcccaaagtgcaccaatgcccaatgaatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 aacacctggacatcctgccattttcactctcccaaagtgcaccaatgcccaatgaatgct 397
Query: 301 tttgagagccacttttatccttatcctgtcgagaaccagcttcagtatgttccagctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 398 tttgagagccacttttatccttatcctgtcgagaaccagcttcagtatgttccagctaat 457
Query: 361 atgttcgctcagagttacccccgggagcaatttcaggaatttcaatatttcgtggtcata 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 atgttcgctcagagttacccccgggagcaatttcaggaatttcaatatttcgtggtcata 517
Query: 421 gacttcgaggctacctgtgataaggataaaaatccccaccctcaagaaataattgagttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 518 gacttcgaggctacctgtgataaggataaaaatccccaccctcaagaaataattgagttc 577
Query: 481 ccatctgtcatagtgagtagtgtgactggccagctggaagcatgtttccaaacatatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 ccatctgtcatagtgagtagtgtgactggccagctggaagcatgtttccaaacatatgtg 637
Query: 541 aggcctacctgcaatcagcatctgactgatttctgcaaggatctgactggtatccagcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 aggcctacctgcaatcagcatctgactgatttctgcaaggatctgactggtatccagcaa 697
Query: 601 attcaggtggacagaggtgttactttgagtgaggctctacttaggcatgacaagtggctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 698 attcaggtggacagaggtgttactttgagtgaggctctacttaggcatgacaagtggctt 757
Query: 661 gaga 664
||||
Sbjct: 758 gaga 761
>gnl|LJGI|FS325602 homologue to UniRef100_A7QMC1 Cluster: Chromosome undetermined
scaffold_125, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_125,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (32%)
Length = 781
Score = 1304 bits (658), Expect = 0.0
Identities = 661/662 (99%)
Strand = Plus / Plus
Query: 1 atgatggcccttgaaaattcagaaaatatgcaaataacctgcgaggcatctctgaaatgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 120 atgatggcccttgaaaattcagaaaatatgcaaataacctgcgaggcatctctgaaatgc 179
Query: 61 ctccagggaaagggattccctagcacttttcagtgtaatgggagttctattacagagcta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 180 ctccagggaaagggattccctagcacttttcagtgtaatgggagttctattacagagcta 239
Query: 121 aaaaatgatcctggtactcatccagctggggatgtttctgaacctaaccgccgtcttggc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 aaaaatgatcctggtactcatccagctggggatgtttctgaacctaaccgccgtcttggc 299
Query: 181 agtgagtttctggagccttccaatgaatttcacagtaaacctacttatcaccatgagtac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 agtgagtttctggagccttccaatgaatttcacagtaaacctacttatcaccatgagtac 359
Query: 241 aacacctggacatcctgccattttcactctcccaaagtgcaccaatgcccaatgaatgct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 aacacctggacatcctgccattttcactctcccaaagtgcaccaatgcccaatgaatgct 419
Query: 301 tttgagagccacttttatccttatcctgtcgagaaccagcttcagtatgttccagctaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 tttgagagccacttttatccttatcctgtcgagaaccagcttcagtatgttccagctaat 479
Query: 361 atgttcgctcagagttacccccgggagcaatttcaggaatttcaatatttcgtggtcata 420
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 480 atgttcgctcagagttacccccgggagcaatttcaggaatttcaatattccgtggtcata 539
Query: 421 gacttcgaggctacctgtgataaggataaaaatccccaccctcaagaaataattgagttc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 gacttcgaggctacctgtgataaggataaaaatccccaccctcaagaaataattgagttc 599
Query: 481 ccatctgtcatagtgagtagtgtgactggccagctggaagcatgtttccaaacatatgtg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ccatctgtcatagtgagtagtgtgactggccagctggaagcatgtttccaaacatatgtg 659
Query: 541 aggcctacctgcaatcagcatctgactgatttctgcaaggatctgactggtatccagcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aggcctacctgcaatcagcatctgactgatttctgcaaggatctgactggtatccagcaa 719
Query: 601 attcaggtggacagaggtgttactttgagtgaggctctacttaggcatgacaagtggctt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 attcaggtggacagaggtgttactttgagtgaggctctacttaggcatgacaagtggctt 779
Query: 661 ga 662
||
Sbjct: 780 ga 781
>gnl|LJGI|TC59896 similar to UniRef100_A7QMC1 Cluster: Chromosome undetermined
scaffold_125, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_125, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 736
Score = 597 bits (301), Expect = e-170
Identities = 301/301 (100%)
Strand = Plus / Plus
Query: 936 catgcataagggtttcaaattttccattaccaattccattatgtggcagacttctgatcg 995
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 catgcataagggtttcaaattttccattaccaattccattatgtggcagacttctgatcg 60
Query: 996 atcactgatgtggaagcagtctcctgaacaaatgagtgttttccctcattacccctacaa 1055
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 atcactgatgtggaagcagtctcctgaacaaatgagtgttttccctcattacccctacaa 120
Query: 1056 agcaaaggatatgaatacccccatcgttcagtaccacccttgctgtttctgtggggtgaa 1115
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcaaaggatatgaatacccccatcgttcagtaccacccttgctgtttctgtggggtgaa 180
Query: 1116 aagcagtaggggcatgatcaggaagccagggcccaagcatgggaaccttttctttggatg 1175
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagcagtaggggcatgatcaggaagccagggcccaagcatgggaaccttttctttggatg 240
Query: 1176 tggaaattggactgcaactagaggtgcccgctgccattactttgaatggatttctgccta 1235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tggaaattggactgcaactagaggtgcccgctgccattactttgaatggatttctgccta 300
Query: 1236 a 1236
|
Sbjct: 301 a 301