Miyakogusa Predicted Gene
- Lj3g3v1896330.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1896330.1 Non Chatacterized Hit- tr|I1MIM1|I1MIM1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.46928
PE,85.66,0,seg,NULL; RB_A,Retinoblastoma-associated protein, A-box;
RB_B,Retinoblastoma-associated protein, B-b,CUFF.43275.1
(3072 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82665 similar to UniRef100_A9UL14 Cluster: Retinoblas... 1542 0.0
gnl|LJGI|TC77976 similar to UniRef100_Q9SLZ4 Cluster: Retinoblas... 886 0.0
gnl|LJGI|TC64733 similar to UniRef100_Q9SLZ4 Cluster: Retinoblas... 646 0.0
gnl|LJGI|TC82080 similar to UniRef100_Q9SLZ4 Cluster: Retinoblas... 428 e-119
gnl|LJGI|TC82542 119 1e-25
>gnl|LJGI|TC82665 similar to UniRef100_A9UL14 Cluster: Retinoblastoma-related protein;
n=1; Medicago sativa|Rep: Retinoblastoma-related protein
- Medicago sativa (Alfalfa), partial (31%)
Length = 962
Score = 1542 bits (778), Expect = 0.0
Identities = 918/964 (95%), Gaps = 3/964 (0%)
Strand = Plus / Plus
Query: 1399 atttttcctagtagtcctcttggggaacgatgtgtaactggaggcctgcaaagtgcaaat 1458
||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 2 atttttcctagtagtcctcttggtgaacgatgtgtaactggaagcctgcaaagtgcaaat 61
Query: 1459 ctcatggacaatatatgggccgaacagcgaagattggaagcactaaagttatactatagg 1518
||||||||||||||||||| |||||||||||||| |||||||| ||||| |||||||||
Sbjct: 62 atcatggacaatatatgggcggaacagcgaagattagaagcactgaagttttactatagg 121
Query: 1519 gtattggaggcaatgtgcagagcagaagcccaaacacttcatgcaactaatttaacttct 1578
|||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 122 gtattggaagcaatgtgcagagcagaagcccaaacactacatgcaactaatttaacttct 181
Query: 1579 ctacttactaatgagaggtttcataggtgtatgctcgcatgttctgcagaattggtcctg 1638
|| || ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 182 cttctaactaatgagaggtttcataggtgtatgcttgcatgttctgcagaattggtcctg 241
Query: 1639 gcaactcacaagactgtaacaatgctgttccctgcagtactggagaggactgggattaca 1698
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gcaactcacaagactgtaacaatgctgttccctgcagtactggagaggactgggattaca 301
Query: 1699 gcttttgatctgagcaaggtgattgaaagtttcattagacatgaagaatccctccccaga 1758
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct: 302 gcttttgatctgagcaaggtgattgaaagtttcattagacatgaagaatcgctcccaaga 361
Query: 1759 gaattgaggcgacatctgaattcattggaagaacgactgttggagagcatggtatgggaa 1818
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||| ||
Sbjct: 362 gaattgaggcgacatctgaactcattggaagaacgacttttggagagcatggtatggcaa 421
Query: 1819 aagggttcctcaatgtataattctttggcagttgctagacctgccctttctgcagaaatc 1878
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 aagggttcttcaatgtataattctttggcagttgctagacctgccctttctgcagaaatc 481
Query: 1879 aatcgtcttggactgttagctgaaccaatgccatcactggatgagattgcaataaatatt 1938
|||||||||||| ||||||||||||||||||||||| |||||||||||||||| | |||
Sbjct: 482 aatcgtcttggaatgttagctgaaccaatgccatcattggatgagattgcaatgcagatt 541
Query: 1939 aacttttcttatggagggctgcctcctgttcctaccttgcctaaatttgagacttcacca 1998
||||| ||||| |||||||| |||||||| ||| |||||||||| ||||||||||||||
Sbjct: 542 aacttctcttacggagggcttcctcctgtgccttccttgcctaagcttgagacttcacca 601
Query: 1999 attcaaaatggggataccagatcaccaaagcgtctctgtacagaacatcgaaatgtgtta 2058
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 attcaaattggggataccagatcaccaaagcgtctctgtacagaacatcgaaatgtgttt 661
Query: 2059 gtggaacgtaattctttcgcttcaccagtaaaagatcggcttcttcccttcagcaacctt 2118
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 662 gtggaacggaattctttcgcttcaccagtgaaagatcggcttcttcccttcagcaaccct 721
Query: 2119 aagtcaaagctaccacctccacctcctttgcagtcagcatttgccagtccaacaaaacca 2178
| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 atgtcaaagct---acccccacctcctttgcagtcagcatttgccagtccaacaaaacca 778
Query: 2179 aatccaggaggtggaggggaaacatgtgcagaaactgggatcaacatcttttttggcaag 2238
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 779 aacccaggaggtggaggggaaacatgtgcagaaactgggatcaacatcttttttggcaag 838
Query: 2239 attattaagttgggagcagtcagaataagtggcatggttgaaaggctacaattgtcccag 2298
|| ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 839 atcattaagttgggagcagtcagaataagtggcatggttgaaagactacaattatcccag 898
Query: 2299 cagataagggagaatgtatactgtcttttccagcggatcctaaatcaatggacatctctt 2358
||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||
Sbjct: 899 cagataagggagaatgtatactgtcttttccagcgaatcctaaatcaacggacatctctt 958
Query: 2359 ttct 2362
||||
Sbjct: 959 ttct 962
>gnl|LJGI|TC77976 similar to UniRef100_Q9SLZ4 Cluster: Retinoblastoma-related protein;
n=1; Pisum sativum|Rep: Retinoblastoma-related protein -
Pisum sativum (Garden pea), partial (22%)
Length = 911
Score = 886 bits (447), Expect = 0.0
Identities = 598/647 (92%), Gaps = 6/647 (0%)
Strand = Plus / Plus
Query: 2390 tgtgttgcttctacggagttgcaaagatttcacaactgagcctaacctttagggagatta 2449
||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |
Sbjct: 5 tgtgttgcttctacggagttgcaaagatttcacaactcagcctaacctttagggagatca 64
Query: 2450 tatacaactacagaaagcaacctcattgcaaaccccaagtttttcgcagtgtatttgttg 2509
|| | ||||||||||||||| |||||||||| |||||||||||| |||||||||||||
Sbjct: 65 tacagggctacagaaagcaaccacattgcaaacaccaagtttttcgtagtgtatttgttg 124
Query: 2510 attggtcatcggcacgccgtaatggagcatgtaaacagagaataggacaggatcatgtcg 2569
|||||||||| ||||| ||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 125 attggtcatcagcacgtcgtaatggagctagtaaacagagaacaggacaggatcatgtcg 184
Query: 2570 acatcatttcattttacaatgaagttttcattccatctgtaaagccactgctggttgaac 2629
|||||||| ||||||||||| || | |||||||| |||||||||||||||||||||||||
Sbjct: 185 acatcattacattttacaatcaaatattcattccctctgtaaagccactgctggttgaac 244
Query: 2630 ttggccctggtggagcaaccatgaaaagtgaccgaaagcctgaagttaat---aaaaatg 2686
||||||||||||||||||||||||||||||||| || || |||||||||| |||||||
Sbjct: 245 ttggccctggtggagcaaccatgaaaagtgaccaaatgcatgaagttaataataaaaatg 304
Query: 2687 acgctcactgtcccgggtctcctaaaatatcaccttttccaagcctcccggatatgtccc 2746
||||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||
Sbjct: 305 acgctcaatgtcctgggtctcctaaaatatcacctttcccaagcctcccagatatgtccc 364
Query: 2747 ccaaaaaagtgtctgcctcacacaatgtttatgtctctccgttacgatcgtctaagatgg 2806
| ||||||||||||||| |||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 365 caaaaaaagtgtctgccgcacacaatgtttatgtctctcccttacgatcgtcgaagatgg 424
Query: 2807 atgctctaatatcacatagctcaaaaagctattatgcatgtgttggggagagcactcatg 2866
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 425 atgctctaatatcacatagctcgaaaagctattatgcatgtgttggggagagcactcatg 484
Query: 2867 catatcagagcccttcaaaagacctgaccgcaatcaataaccgtttgaatggcaaccgca 2926
|||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||
Sbjct: 485 catatcagagcccttcaaaagacctgactgcaatcaataaccatttgaatggcaaccgca 544
Query: 2927 aggtccgaggtgccctcaattttgatgat---gcggatgtgggtttggttagtgactctt 2983
|||||||||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 545 aggtccgaggtgccctcaatttcgatgatgcagcagatgtgggtttggttagtgactcca 604
Query: 2984 tggtttcaaacagcctctatcagcagaatggtagctctggatcatct 3030
||||| ||||||||||| ||| ||||||||| || |||| |||||||
Sbjct: 605 tggttgcaaacagcctcaatctgcagaatggaagttctgcatcatct 651
>gnl|LJGI|TC64733 similar to UniRef100_Q9SLZ4 Cluster: Retinoblastoma-related
protein; n=1; Pisum sativum|Rep: Retinoblastoma-related
protein - Pisum sativum (Garden pea), partial (20%)
Length = 725
Score = 646 bits (326), Expect = 0.0
Identities = 509/570 (89%)
Strand = Plus / Plus
Query: 44 ctgttgataatgccgaccaagctgactcccgcttcgctgacttttgcaagaatgggctgg 103
|||| ||||||| ||||||||||||||| |||||||| |||||||||||||||||||| |
Sbjct: 152 ctgtcgataatggcgaccaagctgactctcgcttcgccgacttttgcaagaatgggctag 211
Query: 104 ctttggatgagaaaagctgtaaagaagcaatgaatctgtttggaaaaaccaagcatattc 163
| |||||||||||||| |||||||||||||| |||||||| ||| ||||| | |||||||
Sbjct: 212 cattggatgagaaaagttgtaaagaagcaatcaatctgttcggagaaaccgaacatattc 271
Query: 164 tactgacaaatgtttcatcaatggggaatggaacgtctgaagatgcagagcggtactggt 223
|||| ||| |||||||||||||||| ||||||| |||||||||||| ||||| |||||||
Sbjct: 272 tactaacatatgtttcatcaatgggaaatggaatgtctgaagatgctgagcgatactggt 331
Query: 224 ttgcttttattttatactcagtcaagagattgactcagaatagtgaggagagtgggcagg 283
| ||||||||||||||||| ||||||||||||||| || | ||||||||||||| |||
Sbjct: 332 tcgcttttattttatactctgtcaagagattgactacaaaaaatgaggagagtggggagg 391
Query: 284 aagaggttgagaacactgggctgaccttgtgtcgtatattgagagcagcgaatcttaaca 343
||||| ||||||||||||||||||||| |||||||||||||||||||| || |||| ||
Sbjct: 392 aagagactgagaacactgggctgaccttttgtcgtatattgagagcagctaagcttagca 451
Query: 344 ttgcagatttttctaaagagctttctcagtttgttgtcaaggctggtcaaattttaagta 403
|||||||||||| |||||||||| ||||||||||||| |||||||||| |||||||||||
Sbjct: 452 ttgcagatttttttaaagagcttcctcagtttgttgttaaggctggtccaattttaagta 511
Query: 404 atctatatggcacggattgggaaaattggcttaaggcaaaggagatgcatgccaatgcta 463
|| ||||||||| ||||||||||| | ||| |||||||||||||||||||||||||||
Sbjct: 512 atttatatggcaaagattgggaaaacagacttcaggcaaaggagatgcatgccaatgcta 571
Query: 464 ctcagttggagatccttagcaagtactataaacgtatatttggagaattttttgttgcac 523
||| ||| ||| |||||||||||||| ||||||||||||| ||| || ||||||||
Sbjct: 572 ttcatttgacgattcttagcaagtactacaaacgtatatttgcagagttctttgttgctt 631
Query: 524 ctgatgcaaatgtcgaaaagaactcaattgttactgttcatgcatctgattaccatcggt 583
||||||||||| | |||||||||||| |||||||||||||||||||||||| ||||| |
Sbjct: 632 ctgatgcaaatattgaaaagaactcatctgttactgttcatgcatctgattatcatcgct 691
Query: 584 ttggatggttacttttcttggcactccgtg 613
||||||||||||||||||||||||| ||||
Sbjct: 692 ttggatggttacttttcttggcacttcgtg 721
>gnl|LJGI|TC82080 similar to UniRef100_Q9SLZ4 Cluster: Retinoblastoma-related protein;
n=1; Pisum sativum|Rep: Retinoblastoma-related protein -
Pisum sativum (Garden pea), partial (8%)
Length = 445
Score = 428 bits (216), Expect = e-119
Identities = 253/266 (95%)
Strand = Plus / Plus
Query: 2807 atgctctaatatcacatagctcaaaaagctattatgcatgtgttggggagagcactcatg 2866
|||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 1 atgctctaatatcacatagctcaaaaagctattacgcatgttttggggagagcactcatg 60
Query: 2867 catatcagagcccttcaaaagacctgaccgcaatcaataaccgtttgaatggcaaccgca 2926
|||||||||||| ||| |||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 61 catatcagagccnttcgaaagacctgaccgccatcaatacccgtttgaatggcaaccgca 120
Query: 2927 aggtccgaggtgccctcaattttgatgatgcggatgtgggtttggttagtgactctttgg 2986
||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 121 aggtccgaggtgccctccattttgatgatgcggatgtggntttggttagtgactctatgg 180
Query: 2987 tttcaaacagcctctatcagcagaatggtagctctggatcatcttcaggtgcaccattga 3046
|| | ||| |||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 181 ttgccaaccgcctctatcagcagaatggtagctctggatcatcttcaggtgcacccttga 240
Query: 3047 agtctgaactactagactcttgaatt 3072
||||||||||||||||||||||||||
Sbjct: 241 agtctgaactactagactcttgaatt 266
>gnl|LJGI|TC82542
Length = 986
Score = 119 bits (60), Expect = 1e-25
Identities = 85/92 (92%), Gaps = 1/92 (1%)
Strand = Plus / Plus
Query: 338 ttaacattgcagatttttctaaagagctttctcagtttgttgtcaaggctggtcaaattt 397
|||||||||||||||||| |||||||||||||||||| ||||||||||||||| |||||
Sbjct: 814 ttaacattgcagattttttcaaagagctttctcagttt-ttgtcaaggctggtccaattt 872
Query: 398 taagtaatctatatggcacggattgggaaaat 429
|||||||||||| || ||| ||||||||||||
Sbjct: 873 taagtaatctatttgacacagattgggaaaat 904