Miyakogusa Predicted Gene

Lj3g3v1855560.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1855560.1 Non Chatacterized Hit- tr|C6T892|C6T892_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4933
PE=,67.58,0,Multidrug resistance efflux transporter EmrE,NULL;
seg,NULL; FAMILY NOT NAMED,NULL; EamA,Drug/metabo,gene.g48165.t1.1
         (966 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC595360 similar to UniRef100_A7QMF9 Cluster: Chromosom...   262   4e-69
gnl|LJGI|TC78636 similar to UniRef100_A7QMF9 Cluster: Chromosome...   141   9e-33
gnl|LJGI|DC599282 similar to UniRef100_A7QMF9 Cluster: Chromosom...   129   3e-29

>gnl|LJGI|DC595360 similar to UniRef100_A7QMF9 Cluster: Chromosome undetermined
           scaffold_125, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_125,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (29%)
          Length = 459

 Score =  262 bits (132), Expect = 4e-69
 Identities = 186/204 (91%)
 Strand = Plus / Plus

                                                                       
Query: 7   ctattacagtttggctacgctggcatgaacattattgctaaggtttccctcgaccaaggc 66
           |||||||| || ||||| |||||||||   |||||||||||||||||||| |||||||||
Sbjct: 150 ctattacaattaggctatgctggcatggttattattgctaaggtttcccttgaccaaggc 209

                                                                       
Query: 67  atgagccactatttcctcgttgtttatcgccacgccattgcaactactgtcatagctcca 126
           |||||||||||| ||||| |||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 210 atgagccactatgtcctcattgtttatcgccacgccattgcaactgctgccatagctcca 269

                                                                       
Query: 127 tttgcctttatttttgaaagggagggtcagccaaagataacaatcccaatttttatgcaa 186
           ||||| ||||||||||||||||||||||| |||||| ||||| || |||||||| |||||
Sbjct: 270 tttgcatttatttttgaaagggagggtcaaccaaaggtaacattctcaatttttttgcaa 329

                                   
Query: 187 attttcatcctagctctcttgggg 210
           || |||||||||||||||||||||
Sbjct: 330 atgttcatcctagctctcttgggg 353


>gnl|LJGI|TC78636 similar to UniRef100_A7QMF9 Cluster: Chromosome undetermined
           scaffold_125, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_125,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (27%)
          Length = 827

 Score =  141 bits (71), Expect = 9e-33
 Identities = 209/255 (81%)
 Strand = Plus / Plus

                                                                       
Query: 604 attggttgggatatgaacttactagctgctgcatatgctggaattgtgaactcaagcata 663
           ||||| |||||||||||||||||||| ||||||||||||||||||||||  |||||||||
Sbjct: 7   attggctgggatatgaacttactagccgctgcatatgctggaattgtgacatcaagcata 66

                                                                       
Query: 664 tcatactatgtacaagggctagtgataaaggaaaaaggacctgtctttgcaactgccttc 723
           ||||| || ||||||||| | || || | | | ||||| ||||| || || ||||| || 
Sbjct: 67  tcatattacgtacaagggttggtaattaggaagaaagggcctgttttcgctactgcattt 126

                                                                       
Query: 724 agccctcttatgatggtttttgttgccatcatgggattctttattcttgcagaaaagcta 783
           || ||||| |||||| |  |||| ||||||||||| | |||||| ||||||||  |  ||
Sbjct: 127 agtcctctaatgatgatcattgtagccatcatgggttcctttatccttgcagagcaaata 186

                                                                       
Query: 784 tatcttggaggtgtgatcggtgccatcttgattgctacaggcttatactctgtcctttgg 843
           | |||||||||  | || ||  ||||||||||||  | ||||||||||||||| || |||
Sbjct: 187 tttcttggagggataattggctccatcttgattgtcataggcttatactctgttctgtgg 246

                          
Query: 844 gggaaacacaaagaa 858
           || || |||||||||
Sbjct: 247 ggaaagcacaaagaa 261


>gnl|LJGI|DC599282 similar to UniRef100_A7QMF9 Cluster: Chromosome undetermined
           scaffold_125, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_125,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (35%)
          Length = 574

 Score =  129 bits (65), Expect = 3e-29
 Identities = 158/189 (83%)
 Strand = Plus / Plus

                                                                       
Query: 13  cagtttggctacgctggcatgaacattattgctaaggtttccctcgaccaaggcatgagc 72
           ||||| ||||| || ||||||||||| ||  |||||||||||||| ||| ||||||||||
Sbjct: 198 cagttcggctatgcaggcatgaacatcatcactaaggtttccctcaaccgaggcatgagc 257

                                                                       
Query: 73  cactatttcctcgttgtttatcgccacgccattgcaactactgtcatagctccatttgcc 132
           |||||| | ||||||||||| ||||||||| | || ||| ||| ||| |||||||| |||
Sbjct: 258 cactatgttctcgttgtttaccgccacgccttcgcgactgctgccatcgctccattcgcc 317

                                                                       
Query: 133 tttatttttgaaagggagggtcagccaaagataacaatcccaatttttatgcaaattttc 192
           ||  |  |||||||| | | |||||||||||||||| | |  || || ||||||||||||
Sbjct: 318 ttattcattgaaaggaaagctcagccaaagataacatttcggatcttcatgcaaattttc 377

                    
Query: 193 atcctagct 201
           |||||||||
Sbjct: 378 atcctagct 386