Miyakogusa Predicted Gene

Lj3g3v1834250.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1834250.1 tr|G7IXZ7|G7IXZ7_MEDTR F-box family-3 OS=Medicago
truncatula GN=MTR_3g048290 PE=4 SV=1,64.29,3e-18,F-box domain,F-box
domain, cyclin-like; F-box,F-box domain, cyclin-like; FAMILY NOT
NAMED,NULL; no d,CUFF.43190.1
         (252 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC57924 similar to UniRef100_A7QK60 Cluster: Chromosome...   194   2e-49

>gnl|LJGI|TC57924 similar to UniRef100_A7QK60 Cluster: Chromosome chr19 scaffold_111,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr19 scaffold_111, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (14%)
          Length = 811

 Score =  194 bits (98), Expect = 2e-49
 Identities = 178/204 (87%), Gaps = 3/204 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggctggtttaatctcacca---cctgatgtacataagctccaaagaaataacgtgggc 57
           |||||||||||||||||| ||   ||||||  ||||||||||||||||| ||| ||||| 
Sbjct: 48  atggctggtttaatctcatcatcacctgatacacataagctccaaagaagtaatgtgggt 107

                                                                       
Query: 58  gacatgaaagatatgatcagcatcttacctgattgtattcttcatcttattctttcttta 117
           || ||||| ||||||||||||| |||||||||| |  ||||||||   ||||||||||| 
Sbjct: 108 gaaatgaaggatatgatcagcaacttacctgatagccttcttcattacattctttctttg 167

                                                                       
Query: 118 ctgcctaccaaagaggctattcgaacttccattttggctaaaaggtggaagtacttgtgg 177
            | ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 168 gtccctaccaaagatgctatacgaacttccattttggctaaaaggtggaagtacttgtgg 227

                                   
Query: 178 accttcttatcttcctttgatttt 201
           |||| |||||||  ||||||||||
Sbjct: 228 acctgcttatctgtctttgatttt 251