Miyakogusa Predicted Gene

Lj3g3v1834160.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1834160.1 Non Chatacterized Hit- tr|I1LDI8|I1LDI8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,52.94,0.39,
,CUFF.43235.1
         (187 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC67222                                                      270   3e-72
gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromoso...    64   3e-10
gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosom...    56   8e-08

>gnl|LJGI|TC67222 
          Length = 1030

 Score =  270 bits (136), Expect = 3e-72
 Identities = 136/136 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtatcacaagtggagagaacattggatcctttatttattttcttctaagagagaaaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 atgtatcacaagtggagagaacattggatcctttatttattttcttctaagagagaaaaa 608

                                                                       
Query: 61  tgtttgatagtattttcaggaaaactagtagagtatgatgagccaatgaacctgatgaag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 tgtttgatagtattttcaggaaaactagtagagtatgatgagccaatgaacctgatgaag 668

                           
Query: 121 agagaatgtttgttgc 136
           ||||||||||||||||
Sbjct: 669 agagaatgtttgttgc 684


>gnl|LJGI|TC70172 homologue to UniRef100_A7QTU6 Cluster: Chromosome undetermined
           scaffold_171, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_171,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (10%)
          Length = 688

 Score = 63.9 bits (32), Expect = 3e-10
 Identities = 44/48 (91%)
 Strand = Plus / Plus

                                                           
Query: 79  ggaaaactagtagagtatgatgagccaatgaacctgatgaagagagaa 126
           |||||||| || ||||||||||| ||||||||| ||||||||||||||
Sbjct: 336 ggaaaactggtcgagtatgatgaaccaatgaacttgatgaagagagaa 383


>gnl|LJGI|GO023806 similar to UniRef100_A7QTS7 Cluster: Chromosome undetermined
           scaffold_171, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_171,
           whole genome shotgun sequence - Vitis vinifera (Grape),
           partial (9%)
          Length = 733

 Score = 56.0 bits (28), Expect = 8e-08
 Identities = 34/36 (94%)
 Strand = Plus / Plus

                                               
Query: 91  gagtatgatgagccaatgaacctgatgaagagagaa 126
           |||||||||||||| | |||||||||||||||||||
Sbjct: 494 gagtatgatgagccgacgaacctgatgaagagagaa 529