Miyakogusa Predicted Gene
- Lj3g3v1739290.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1739290.1 tr|D8TSE5|D8TSE5_VOLCA Zinc finger related
protein OS=Volvox carteri GN=ard1 PE=4 SV=1,22.68,3e-17,SUBFAMILY NOT
NAMED,NULL; ARSENITE-RESISTANCE PROTEIN 2,NULL; DUF3546,Protein of
unknown function DU,CUFF.43058.1
(1980 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC75897 similar to UniRef100_Q9ZVD0 Cluster: Expressed ... 1340 0.0
gnl|LJGI|TC65267 homologue to UniRef100_A7QAH7 Cluster: Chromoso... 803 0.0
gnl|LJGI|TC81837 similar to UniRef100_Q9ZVD0 Cluster: Expressed ... 444 e-124
gnl|LJGI|TC70554 similar to UniRef100_A7PG49 Cluster: Chromosome... 420 e-116
gnl|LJGI|DC599744 weakly similar to UniRef100_A8J790 Cluster: Hy... 202 6e-51
gnl|LJGI|TC78377 similar to UniRef100_A7QAH6 Cluster: Chromosome... 196 4e-49
gnl|LJGI|TC75816 similar to UniRef100_A7PG49 Cluster: Chromosome... 111 2e-23
gnl|LJGI|BP082693 UniRef100_Q9VLI3 Cluster: CG12438-PA; n=1; Dro... 107 3e-22
>gnl|LJGI|TC75897 similar to UniRef100_Q9ZVD0 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein - Arabidopsis
thaliana (Mouse-ear cress), partial (27%)
Length = 676
Score = 1340 bits (676), Expect = 0.0
Identities = 676/676 (100%)
Strand = Plus / Plus
Query: 1139 tgggtcccataataattttaagaggtctatcatcggttaagggtttagagggtgttgaac 1198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgggtcccataataattttaagaggtctatcatcggttaagggtttagagggtgttgaac 60
Query: 1199 ttttggacacacttattacatatctttggcggattcatggtgtagattattatggtttga 1258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ttttggacacacttattacatatctttggcggattcatggtgtagattattatggtttga 120
Query: 1259 ttgagactattgaggctaagggttttaggcatgtcaggccagagggaaccacacatgaag 1318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ttgagactattgaggctaagggttttaggcatgtcaggccagagggaaccacacatgaag 180
Query: 1319 aaaaaggtaaatcagggtctgaatgggagaagaaactagactcattttggcagggaaggc 1378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aaaaaggtaaatcagggtctgaatgggagaagaaactagactcattttggcagggaaggc 240
Query: 1379 tgaatggtcaggatcccgtggaagtaatgactgctaaggagaagatagatgctgcagcag 1438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgaatggtcaggatcccgtggaagtaatgactgctaaggagaagatagatgctgcagcag 300
Query: 1439 cggaagcgttggatccatatattaggaaaattagggatgaaaagtatggatggaagtatg 1498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cggaagcgttggatccatatattaggaaaattagggatgaaaagtatggatggaagtatg 360
Query: 1499 gttgtggagccaagggctgcacgaagctttttcatgcttctgaatttgtgcacaaacacc 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gttgtggagccaagggctgcacgaagctttttcatgcttctgaatttgtgcacaaacacc 420
Query: 1559 tgaagctaaaacacccagagcttgctgttgaacaaaccacaaaagtgcgtgaggatctct 1618
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 tgaagctaaaacacccagagcttgctgttgaacaaaccacaaaagtgcgtgaggatctct 480
Query: 1619 attttcaaaattacatgaatgatccagatgctcctggtggaaagcctgtaatgcagcaaa 1678
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 attttcaaaattacatgaatgatccagatgctcctggtggaaagcctgtaatgcagcaaa 540
Query: 1679 ctcagagggacaaacctttaaagcgaagattaggtattgagggccgattgagagatgatc 1738
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ctcagagggacaaacctttaaagcgaagattaggtattgagggccgattgagagatgatc 600
Query: 1739 gtggtagtcgtcaaaatcatgatcggagtgaccgattgaatgatggagatagacctgaga 1798
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 gtggtagtcgtcaaaatcatgatcggagtgaccgattgaatgatggagatagacctgaga 660
Query: 1799 attctccatcccgcga 1814
||||||||||||||||
Sbjct: 661 attctccatcccgcga 676
>gnl|LJGI|TC65267 homologue to UniRef100_A7QAH7 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (24%)
Length = 759
Score = 803 bits (405), Expect = 0.0
Identities = 419/426 (98%)
Strand = Plus / Plus
Query: 144 accacctgcccgcaggagggacaggcgggacgaccgggatttcgatcgtccacctaaccg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 accacctgcccgcaggagggacaggcgggacgaccgggatttcgatcgtccacctaaccg 315
Query: 204 ccgcgattactacgaccgcagcaacaactnnnnnnngcccaaagaccgggacagggactt 263
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 316 ccgcgattactacgaccgcagcaacaactcccccccgcccaaagaccgggacagggactt 375
Query: 264 caagcgccgccgcagcccctcacctccttcccaacgcgaccgcgaccgccgtcactcccc 323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 caagcgccgccgcagcccctcacctccttcccaacgcgaccgcgaccgccgtcactcccc 435
Query: 324 tcctcccccctacaagcgttccaggagaggtagtccccgcggtggttaccgttacggtcc 383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tcctcccccctacaagcgttccaggagaggtagtccccgcggtggttaccgttacggtcc 495
Query: 384 cgatgacagatttggatatgataattctggcggttatgaacggggaatgggtggaagggt 443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 cgatgacagatttggatatgataattctggcggttatgaacggggaatgggtggaagggt 555
Query: 444 tggttatgtcgatgacaagtcttatggccggtttggacatcgttcagctggagaatatca 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 tggttatgtcgatgacaagtcttatggccggtttggacatcgttcagctggagaatatca 615
Query: 504 aaatggtatttctgatgtggaatccaatcgtggttatgcagacttgccaagtggcagtgc 563
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaatggtatttctgatgtggaatccaatcgtggttatgcagacttgccaagtggcagtgc 675
Query: 564 acaaag 569
||||||
Sbjct: 676 acaaag 681
Score = 83.8 bits (42), Expect = 4e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 atggcggaggtcatcaacgctcccccggattcactcgacaaa 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 113 atggcggaggtcatcaacgctcccccggattcactcgacaaa 154
>gnl|LJGI|TC81837 similar to UniRef100_Q9ZVD0 Cluster: Expressed protein; n=1;
Arabidopsis thaliana|Rep: Expressed protein -
Arabidopsis thaliana (Mouse-ear cress), partial (18%)
Length = 1241
Score = 444 bits (224), Expect = e-124
Identities = 404/464 (87%)
Strand = Plus / Plus
Query: 382 cccgatgacagatttggatatgataattctggcggttatgaacggggaatgggtggaagg 441
||||||||||| |||||| || || | ||||| || |||||||||||| |||||||||||
Sbjct: 478 cccgatgacaggtttggacataattactctggtggctatgaacggggagtgggtggaagg 537
Query: 442 gttggttatgtcgatgacaagtcttatggccggtttggacatcgttcagctggagaatat 501
|||||| | |||| | ||| |||||| ||||||||||||| || ||||| | || |
Sbjct: 538 actggttacgcaaatgaaaggtcgtatggcaggtttggacatcgatctgctgggggattt 597
Query: 502 caaaatggtatttctgatgtggaatccaatcgtggttatgcagacttgccaagtggcagt 561
|||||||| | |||||||||||| |||||||||||| |||| ||||||||||| ||
Sbjct: 598 caaaatggaaattctgatgtggatatgaatcgtggttattcagatttgccaagtggaggt 657
Query: 562 gcacaaagagaagggttgatgtcctataagcaattcattcaggagcttgaggatgatata 621
||||||||||| |||||||||||||||||||||||||||||||||||||| |||||| ||
Sbjct: 658 gcacaaagagaggggttgatgtcctataagcaattcattcaggagcttgaagatgatgta 717
Query: 622 ctgcctgctgaagcagaacgtaggtatcaagaatacaagtcggagtacatttccacccaa 681
|||||||||||||| || |||||||||||||| ||||| || ||||| ||||| || |||
Sbjct: 718 ctgcctgctgaagctgagcgtaggtatcaagagtacaaatcagagtatatttctactcaa 777
Query: 682 aaaagaacctattttaattctcataaggatgaggagtggttgaaagataaatatcatcca 741
||| || | ||||||||| |||||||||||||||||||||||||||| || |||||||||
Sbjct: 778 aaacgagcttattttaatgctcataaggatgaggagtggttgaaagacaagtatcatcca 837
Query: 742 acaaatttgcttacagtcattgaaaggaggaatgaaaatgctcgacagctggcaaaggac 801
|||||||| |||||||| ||||||||||||||||||||||| |||| ||||||||||
Sbjct: 838 acaaatttacttacagtgattgaaaggaggaatgaaaatgcacgacgagtggcaaaggat 897
Query: 802 tttttgcttgatttgcagagtggaacattagacctaaatcctgg 845
||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 898 tttttgcttgatttgcaaagtggaacattagacctgaattctgg 941
Score = 54.0 bits (27), Expect = 3e-06
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 247 gaccgggacagggacttcaagcgccgccgcagccc 281
||||| || ||||||||||||||||||||||||||
Sbjct: 349 gaccgtgatagggacttcaagcgccgccgcagccc 383
>gnl|LJGI|TC70554 similar to UniRef100_A7PG49 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 499
Score = 420 bits (212), Expect = e-116
Identities = 338/380 (88%)
Strand = Plus / Plus
Query: 466 tatggccggtttggacatcgttcagctggagaatatcaaaatggtatttctgatgtggaa 525
|||||| ||||||||||||| || ||||| | || ||||||||| | ||||||||||||
Sbjct: 23 tatggcaggtttggacatcgatctgctgggggatttcaaaatggaaattctgatgtggat 82
Query: 526 tccaatcgtggttatgcagacttgccaagtggcagtgcacaaagagaagggttgatgtcc 585
|||||||||||| |||| ||||||||||| ||||||||||||| ||||||||||||
Sbjct: 83 atgaatcgtggttattcagatttgccaagtggaggtgcacaaagagaggggttgatgtcc 142
Query: 586 tataagcaattcattcaggagcttgaggatgatatactgcctgctgaagcagaacgtagg 645
|||||||||||||||||||||||||| |||||| |||||||||||||||| || ||||||
Sbjct: 143 tataagcaattcattcaggagcttgaagatgatgtactgcctgctgaagctgagcgtagg 202
Query: 646 tatcaagaatacaagtcggagtacatttccacccaaaaaagaacctattttaattctcat 705
|||||||| ||||| || ||||| ||||| || |||||| || | ||||||||| |||||
Sbjct: 203 tatcaagagtacaaatcagagtatatttctactcaaaaacgagcttattttaatgctcat 262
Query: 706 aaggatgaggagtggttgaaagataaatatcatccaacaaatttgcttacagtcattgaa 765
||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||
Sbjct: 263 aaggatgaggagtggttgaaagacaagtatcatccaacaaatttacttacagtgattgaa 322
Query: 766 aggaggaatgaaaatgctcgacagctggcaaaggactttttgcttgatttgcagagtgga 825
||||||||||||||||| |||| |||||||||| ||||||||||||||||| ||||||
Sbjct: 323 aggaggaatgaaaatgcacgacgagtggcaaaggattttttgcttgatttgcaaagtgga 382
Query: 826 acattagacctaaatcctgg 845
||||||||||| ||||||||
Sbjct: 383 acattagacctgaatcctgg 402
>gnl|LJGI|DC599744 weakly similar to UniRef100_A8J790 Cluster: Hydroxyproline-rich
glycoprotein, stress-induced; n=1; Chlamydomonas
reinhardtii|Rep: Hydroxyproline-rich glycoprotein,
stress-induced - Chlamydomonas reinhardtii, partial (8%)
Length = 337
Score = 202 bits (102), Expect = 6e-51
Identities = 116/123 (94%)
Strand = Plus / Plus
Query: 144 accacctgcccgcaggagggacaggcgggacgaccgggatttcgatcgtccacctaaccg 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 accacctgcccgcaggagggacaggcgggacgaccgggatttcgatcgtccacctaaccg 274
Query: 204 ccgcgattactacgaccgcagcaacaactnnnnnnngcccaaagaccgggacagggactt 263
||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 275 ccgcgattactacgaccgcagcaacaactcccccccgcccaaagaccgggacagggactt 334
Query: 264 caa 266
|||
Sbjct: 335 caa 337
Score = 83.8 bits (42), Expect = 4e-15
Identities = 42/42 (100%)
Strand = Plus / Plus
Query: 1 atggcggaggtcatcaacgctcccccggattcactcgacaaa 42
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atggcggaggtcatcaacgctcccccggattcactcgacaaa 119
>gnl|LJGI|TC78377 similar to UniRef100_A7QAH6 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(19%)
Length = 484
Score = 196 bits (99), Expect = 4e-49
Identities = 102/103 (99%)
Strand = Plus / Plus
Query: 1878 acctggtgtttctccatttgcctcagatatgcctcctccaccagtattgatgcctgtacc 1937
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acctggtgtttctccatttgcctcagatatgcctcctccaccagtattgatgcctgtacc 60
Query: 1938 tggtgctgaaccattaggaccctttgttcctgctccaccagaa 1980
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 61 tggtgctggaccattaggaccctttgttcctgctccaccagaa 103
>gnl|LJGI|TC75816 similar to UniRef100_A7PG49 Cluster: Chromosome chr6 scaffold_15,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_15, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (14%)
Length = 654
Score = 111 bits (56), Expect = 2e-23
Identities = 85/94 (90%), Gaps = 3/94 (3%)
Strand = Plus / Plus
Query: 1889 ctccatttgcctcagatatgcc---tcctccaccagtattgatgcctgtacctggtgctg 1945
|||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||
Sbjct: 19 ctccatttacctcagatatgccccctcctccaccagttttgatgcctgtacctggtgctg 78
Query: 1946 aaccattaggaccctttgttcctgctccaccaga 1979
|| || ||||||||||||||||||||||||||
Sbjct: 79 ggcctttgggaccctttgttcctgctccaccaga 112
>gnl|LJGI|BP082693 UniRef100_Q9VLI3 Cluster: CG12438-PA; n=1; Drosophila
melanogaster|Rep: CG12438-PA - Drosophila melanogaster
(Fruit fly), partial (5%)
Length = 370
Score = 107 bits (54), Expect = 3e-22
Identities = 54/54 (100%)
Strand = Plus / Minus
Query: 516 tgatgtggaatccaatcgtggttatgcagacttgccaagtggcagtgcacaaag 569
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 tgatgtggaatccaatcgtggttatgcagacttgccaagtggcagtgcacaaag 187
Score = 61.9 bits (31), Expect = 1e-08
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 459 caagtcttatggccggtttggacatcgttcagctggagaatatcaaaatggtatttctg 517
|||||||| |||||| |||||||||||||| ||||| | | |||||||||| |||||||
Sbjct: 370 caagtcttctggccgatttggacatcgttctgctgggggacatcaaaatgggatttctg 312