Miyakogusa Predicted Gene

Lj3g3v1729000.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1729000.1 Non Chatacterized Hit- tr|D8S6M0|D8S6M0_SELML
Putative uncharacterized protein OS=Selaginella
moelle,29.23,0.000000000000005,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL; coiled-coil,NULL,
NODE_51780_length_1883_cov_34.225704.path2.1
         (1427 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73874 similar to UniRef100_A7NZU9 Cluster: Chromosome...  1269   0.0  
gnl|LJGI|FS323931 similar to UniRef100_A7NZU9 Cluster: Chromosom...   392   e-108

>gnl|LJGI|TC73874 similar to UniRef100_A7NZU9 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (36%)
          Length = 782

 Score = 1269 bits (640), Expect = 0.0
 Identities = 640/640 (100%)
 Strand = Plus / Plus

                                                                        
Query: 788  agaccctcataagccagattgaagaaacagatcatgctttgatagacaacttgaacttgc 847
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    agaccctcataagccagattgaagaaacagatcatgctttgatagacaacttgaacttgc 60

                                                                        
Query: 848  ttcttcaaccttacaagctctcccttgattccaaatactcaaaggcagttctgtaccatt 907
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61   ttcttcaaccttacaagctctcccttgattccaaatactcaaaggcagttctgtaccatt 120

                                                                        
Query: 908  ttgaagctttcataaaccaatctctcttccaagacttcgagaattgtgtgttccaaaaga 967
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  ttgaagctttcataaaccaatctctcttccaagacttcgagaattgtgtgttccaaaaga 180

                                                                        
Query: 968  atggctgcgcaaaattcttagaccctagacaagatcgccaagcacaattctcctcattcg 1027
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181  atggctgcgcaaaattcttagaccctagacaagatcgccaagcacaattctcctcattcg 240

                                                                        
Query: 1028 tcgcgctaagaaacctgagctggaatgaggtgctgagaaagggtactaaatattacagtg 1087
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241  tcgcgctaagaaacctgagctggaatgaggtgctgagaaagggtactaaatattacagtg 300

                                                                        
Query: 1088 aagagttcagcaagttctgtgaccagaaaatgagttgcatcatcactgcactgaattggt 1147
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  aagagttcagcaagttctgtgaccagaaaatgagttgcatcatcactgcactgaattggt 360

                                                                        
Query: 1148 tgaggccttggcatgagcagctacttcaagctttctttgtggcagcaaaatgcatatggt 1207
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361  tgaggccttggcatgagcagctacttcaagctttctttgtggcagcaaaatgcatatggt 420

                                                                        
Query: 1208 tgctgcatcttctggcattttctttcaacccgccattgggaattttgagggtggaagaga 1267
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421  tgctgcatcttctggcattttctttcaacccgccattgggaattttgagggtggaagaga 480

                                                                        
Query: 1268 ataaaagctttgatccccactacatggaagatttggtcacagataggcagaggtcacagg 1327
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481  ataaaagctttgatccccactacatggaagatttggtcacagataggcagaggtcacagg 540

                                                                        
Query: 1328 gtccaagcagggttaagatcatggtggtgcctgggttctatgttcaggatagggtcttga 1387
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541  gtccaagcagggttaagatcatggtggtgcctgggttctatgttcaggatagggtcttga 600

                                                    
Query: 1388 agtgtaaagttatttgcaggcacaaatctgcaccctaaag 1427
            ||||||||||||||||||||||||||||||||||||||||
Sbjct: 601  agtgtaaagttatttgcaggcacaaatctgcaccctaaag 640


>gnl|LJGI|FS323931 similar to UniRef100_A7NZU9 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (15%)
          Length = 534

 Score =  392 bits (198), Expect = e-108
 Identities = 198/198 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggttccagattacaaggagaactcaagttcaaagatgggacaaccttttagttttccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 atggttccagattacaaggagaactcaagttcaaagatgggacaaccttttagttttccc 396

                                                                       
Query: 61  aaccttaacttagaatctcacaattgtcctgctgatgatgccaaatcagtgactggttca 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 aaccttaacttagaatctcacaattgtcctgctgatgatgccaaatcagtgactggttca 456

                                                                       
Query: 121 tgtggaaatcacatcactgttcttcaaacatcccctaatgattacttcaagtctaggagg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 tgtggaaatcacatcactgttcttcaaacatcccctaatgattacttcaagtctaggagg 516

                             
Query: 181 agaaacagtttggatgat 198
           ||||||||||||||||||
Sbjct: 517 agaaacagtttggatgat 534