Miyakogusa Predicted Gene

Lj3g3v1706700.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1706700.1 Non Chatacterized Hit- tr|I1MDA5|I1MDA5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.28432
PE,70.46,0,seg,NULL; ZINC_FINGER_C2H2_2,Zinc finger, C2H2;
AZ2-RELATED,NULL; ZINC FINGER PROTEIN,NULL; ZINC_FIN,CUFF.43000.1
         (1050 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromos...   864   0.0  
gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromos...   119   4e-26
gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromoso...   107   1e-22

>gnl|LJGI|BP051546 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr8 scaffold_34, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (34%)
          Length = 574

 Score =  864 bits (436), Expect = 0.0
 Identities = 438/439 (99%)
 Strand = Plus / Minus

                                                                        
Query: 612  cagaaaagggccagagtctctaagaggaacacaaccaacagcaatgctaagactcccatg 671
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574  cagaaaagggccagagtctctaagaggaacacaaccaacagcaatgctaagactcccatg 515

                                                                        
Query: 672  ctattgctgtgcaccaggatgcaagaacaacattgaccatccaagagcaaaaccactcaa 731
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514  ctattgctgtgcaccaggatgcaagaacaacattgaccatccaagagcaaaaccactcaa 455

                                                                        
Query: 732  agacttcagaaccctccaaacacattacaagagaaagcacggaatcaaacctttcatgtg 791
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454  agacttcagaaccctccaaacacattacaagagaaagcacggaatcaaacctttcatgtg 395

                                                                        
Query: 792  cagaaaatgttgcaaagcgtttgcagtgagaggagattggaggactcatgagaagaactg 851
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394  cagaaaatgttgcaaagcgtttgcagtgagaggagattggaggactcatgagaagaactg 335

                                                                        
Query: 852  tgggaagctttggtattgctcttgtgggtccgatttcaagcacaagagatctcttaagga 911
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334  tgggaagctttggtattgctcttgtgggtccgatttcaagcacaagagatctcttaagga 275

                                                                        
Query: 912  tcatatcaaggcgtttggaaatggacacaaagcttatattaatggaattgatgataattg 971
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 274  tcatatcaaggcgtttggaaatggacacnaagcttatattaatggaattgatgataattg 215

                                                                        
Query: 972  tcttcttgatcaagatgatattgaagggggttctgaagttgagcaagaaaatgatgagtc 1031
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214  tcttcttgatcaagatgatattgaagggggttctgaagttgagcaagaaaatgatgagtc 155

                               
Query: 1032 tttgcatagtcatggttga 1050
            |||||||||||||||||||
Sbjct: 154  tttgcatagtcatggttga 136


>gnl|LJGI|FS360083 homologue to UniRef100_A7QFD3 Cluster: Chromosome undetermined
           scaffold_87, whole genome shotgun sequence; n=2; Vitis
           vinifera|Rep: Chromosome undetermined scaffold_87, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (17%)
          Length = 785

 Score =  119 bits (60), Expect = 4e-26
 Identities = 93/104 (89%)
 Strand = Plus / Minus

                                                                       
Query: 811 tttgcagtgagaggagattggaggactcatgagaagaactgtgggaagctttggtattgc 870
           |||||||| | ||| ||||||||||||||||||||||||||||| ||| | |||||||||
Sbjct: 768 tttgcagtcaaaggggattggaggactcatgagaagaactgtggcaagttgtggtattgc 709

                                                       
Query: 871 tcttgtgggtccgatttcaagcacaagagatctcttaaggatca 914
            ||||||| || ||||||||||||||||||||||| || |||||
Sbjct: 708 acttgtggctcagatttcaagcacaagagatctctcaaagatca 665


>gnl|LJGI|TC76316 homologue to UniRef100_A7PWB2 Cluster: Chromosome chr8 scaffold_34,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr8 scaffold_34, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (18%)
          Length = 588

 Score =  107 bits (54), Expect = 1e-22
 Identities = 84/94 (89%)
 Strand = Plus / Plus

                                                                       
Query: 838 catgagaagaactgtgggaagctttggtattgctcttgtgggtccgatttcaagcacaag 897
           ||||||||||| |||||||||||||||||||||   |||||||| |||||||||||||||
Sbjct: 9   catgagaagaattgtgggaagctttggtattgcatctgtgggtctgatttcaagcacaag 68

                                             
Query: 898 agatctcttaaggatcatatcaaggcgtttggaa 931
           || ||||| |||||||| ||||| || |||||||
Sbjct: 69  aggtctctaaaggatcacatcaaagcttttggaa 102