Miyakogusa Predicted Gene
- Lj3g3v1684630.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1684630.1 CUFF.42995.1
(2610 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|AV427579 similar to UniRef100_A7NZS0 Cluster: Chromosom... 791 0.0
gnl|LJGI|BP033927 similar to UniRef100_P35616 Cluster: Neurofila... 773 0.0
gnl|LJGI|TC79244 similar to UniRef100_A7NZS0 Cluster: Chromosome... 301 1e-80
gnl|LJGI|TC76241 117 4e-25
>gnl|LJGI|AV427579 similar to UniRef100_A7NZS0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (16%)
Length = 399
Score = 791 bits (399), Expect = 0.0
Identities = 399/399 (100%)
Strand = Plus / Plus
Query: 1875 tcttgactggcctacgaagccacattccaagctaattgtgatagggatagcaaataccat 1934
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcttgactggcctacgaagccacattccaagctaattgtgatagggatagcaaataccat 60
Query: 1935 ggatcttccagagaagttgcttcctcgtatatcaagccgaatgggcatacataggctttg 1994
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ggatcttccagagaagttgcttcctcgtatatcaagccgaatgggcatacataggctttg 120
Query: 1995 ctttagcccatataattatcagcagcttcaagaaatcatttctagtcgcctcaagggaat 2054
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctttagcccatataattatcagcagcttcaagaaatcatttctagtcgcctcaagggaat 180
Query: 2055 tgatgtatttgaaaagcaagctatagagtttgcttcaagaaaggttgcagccatctcagg 2114
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgatgtatttgaaaagcaagctatagagtttgcttcaagaaaggttgcagccatctcagg 240
Query: 2115 agatgcacgtcgtgctttggagatatgcagacgtgcagctgaaatagcagattaccgtac 2174
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 agatgcacgtcgtgctttggagatatgcagacgtgcagctgaaatagcagattaccgtac 300
Query: 2175 aaagaagctagtttcaagttctgattcttttactgcagggaagggacttgttgcaatggc 2234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 aaagaagctagtttcaagttctgattcttttactgcagggaagggacttgttgcaatggc 360
Query: 2235 agacgttgaagcagccattcaagaaatgttccaagcacc 2273
|||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agacgttgaagcagccattcaagaaatgttccaagcacc 399
>gnl|LJGI|BP033927 similar to UniRef100_P35616 Cluster: Neurofilament light
polypeptide; n=1; Xenopus laevis|Rep: Neurofilament
light polypeptide - Xenopus laevis (African clawed
frog), partial (4%)
Length = 476
Score = 773 bits (390), Expect = 0.0
Identities = 390/390 (100%)
Strand = Plus / Plus
Query: 1 atggcagcagcaacacctaccaagtctttcaaatctccctcgaaacccaatctacgatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 21 atggcagcagcaacacctaccaagtctttcaaatctccctcgaaacccaatctacgatca 80
Query: 61 caatctactgctaaaccctcaccttccatccctgccacaccacaatccctccctcctctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 81 caatctactgctaaaccctcaccttccatccctgccacaccacaatccctccctcctctt 140
Query: 121 cctcgcagatccaagcgatcctcaaagtccctcaccttcgattcccctaaagcttctcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 141 cctcgcagatccaagcgatcctcaaagtccctcaccttcgattcccctaaagcttctcat 200
Query: 181 cagggagctgaatcttccgaatttcgactcgaaactccgagaagaaggaagaccagtgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagggagctgaatcttccgaatttcgactcgaaactccgagaagaaggaagaccagtgtt 260
Query: 241 gaggaatctggcgaaggcggagtcgtgacccgtagaactgctactagaggaagtagaggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaggaatctggcgaaggcggagtcgtgacccgtagaactgctactagaggaagtagaggt 320
Query: 301 ggaattgttgatacgccgaagaagcgaaatgggaagggggcgtcaattgatgctcaattt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaattgttgatacgccgaagaagcgaaatgggaagggggcgtcaattgatgctcaattt 380
Query: 361 gctccggtatcgcctgatcaatcggaaagt 390
||||||||||||||||||||||||||||||
Sbjct: 381 gctccggtatcgcctgatcaatcggaaagt 410
>gnl|LJGI|TC79244 similar to UniRef100_A7NZS0 Cluster: Chromosome chr6 scaffold_3,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr6 scaffold_3, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (6%)
Length = 551
Score = 301 bits (152), Expect = 1e-80
Identities = 152/152 (100%)
Strand = Plus / Plus
Query: 2459 gcaagctaggcgagtgcagaattattttatgtgaagcaggggccaagcacaggctgcaaa 2518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gcaagctaggcgagtgcagaattattttatgtgaagcaggggccaagcacaggctgcaaa 60
Query: 2519 aattgcagctcaatttcccaagcgatgatgtagccttttcgctgagagactgcaaagatc 2578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aattgcagctcaatttcccaagcgatgatgtagccttttcgctgagagactgcaaagatc 120
Query: 2579 tgccttggttgtcgaagtatctaatgtaggaa 2610
||||||||||||||||||||||||||||||||
Sbjct: 121 tgccttggttgtcgaagtatctaatgtaggaa 152
>gnl|LJGI|TC76241
Length = 427
Score = 117 bits (59), Expect = 4e-25
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 2552 ccttttcgctgagagactgcaaagatctgccttggttgtcgaagtatctaatgtaggaa 2610
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ccttttcgctgagagactgcaaagatctgccttggttgtcgaagtatctaatgtaggaa 61