Miyakogusa Predicted Gene

Lj3g3v1683560.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1683560.1 tr|B9HP97|B9HP97_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_650201 PE=4
SV=1,75,9e-19,seg,NULL,CUFF.42987.1
         (288 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC58886 similar to UniRef100_A7NYN4 Cluster: Chromosome...   571   e-163

>gnl|LJGI|TC58886 similar to UniRef100_A7NYN4 Cluster: Chromosome chr6 scaffold_3,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr6 scaffold_3, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (49%)
          Length = 823

 Score =  571 bits (288), Expect = e-163
 Identities = 288/288 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcaagggcattgggtagcacagttgatggacttcgaaactattccttactcagattt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 atggcaagggcattgggtagcacagttgatggacttcgaaactattccttactcagattt 192

                                                                       
Query: 61  tcacttagctttatcagaactctttctacatcttctccatcatcttctgctgctgctgct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 tcacttagctttatcagaactctttctacatcttctccatcatcttctgctgctgctgct 252

                                                                       
Query: 121 gacactagcaaacctaagaaatcaaagcgaagaaagaagaacttgtttgaggtggctcaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 gacactagcaaacctaagaaatcaaagcgaagaaagaagaacttgtttgaggtggctcaa 312

                                                                       
Query: 181 ttcttacctaactggggaatcggctatcatatggccaagactcactggaaagaaattact 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 ttcttacctaactggggaatcggctatcatatggccaagactcactggaaagaaattact 372

                                                           
Query: 241 tacgaaatcacaaaaataaatctctacaaggatgggaaacatggcaag 288
           ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 tacgaaatcacaaaaataaatctctacaaggatgggaaacatggcaag 420