Miyakogusa Predicted Gene
- Lj3g3v1682540.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1682540.1 tr|A4RTY0|A4RTY0_OSTLU MPT family transporter:
inner membrane translocase (Import) Tim10 OS=Ostreoco,50.68,5e-18,no
description,Mitochondrial inner membrane translocase complex,
Tim8/9/10/13-zinc finger-like; SUBF,CUFF.42994.1
(252 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|BW599179 similar to UniRef100_Q9XH47 Cluster: Small zin... 500 e-141
gnl|LJGI|TC63055 similar to UniRef100_Q9XH47 Cluster: Small zinc... 452 e-127
gnl|LJGI|TC81386 similar to UniRef100_Q9XH47 Cluster: Small zinc... 428 e-120
gnl|LJGI|BP039616 UniRef100_Q9XH47 Cluster: Small zinc finger-li... 58 3e-08
>gnl|LJGI|BW599179 similar to UniRef100_Q9XH47 Cluster: Small zinc finger-like
protein; n=1; Pinus taeda|Rep: Small zinc finger-like
protein - Pinus taeda (Loblolly pine), partial (98%)
Length = 472
Score = 500 bits (252), Expect = e-141
Identities = 252/252 (100%)
Strand = Plus / Plus
Query: 1 atggctgcaccaccttccgcccttgataaagaacagatttttggaatggctgaaaaggag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 39 atggctgcaccaccttccgcccttgataaagaacagatttttggaatggctgaaaaggag 98
Query: 61 atggaatacagggtcgaattgttcaacaagatgacccagacctgtttcaacaagtgtgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 99 atggaatacagggtcgaattgttcaacaagatgacccagacctgtttcaacaagtgtgtt 158
Query: 121 gagaacaggtacaaggagtctgagctaaatatgggtgaaaatagttgcattgaccgctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 gagaacaggtacaaggagtctgagctaaatatgggtgaaaatagttgcattgaccgctgt 218
Query: 181 gtttcaaaatattggcatgttactaatttaattggtcagctgcttggttctgggaggcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 gtttcaaaatattggcatgttactaatttaattggtcagctgcttggttctgggaggcct 278
Query: 241 ccaatgtaaacc 252
||||||||||||
Sbjct: 279 ccaatgtaaacc 290
>gnl|LJGI|TC63055 similar to UniRef100_Q9XH47 Cluster: Small zinc finger-like
protein; n=1; Pinus taeda|Rep: Small zinc finger-like
protein - Pinus taeda (Loblolly pine), partial (98%)
Length = 683
Score = 452 bits (228), Expect = e-127
Identities = 246/252 (97%)
Strand = Plus / Plus
Query: 1 atggctgcaccaccttccgcccttgataaagaacagatttttggaatggctgaaaaggag 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 200 atggctgcaccgccttccgcccttgataaagaacagatttttggaatggctgagaaggag 259
Query: 61 atggaatacagggtcgaattgttcaacaagatgacccagacctgtttcaacaagtgtgtt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 atggaatacagggttgaattgttcaacaagatgacccagacctgtttcaacaagtgtgtt 319
Query: 121 gagaacaggtacaaggagtctgagctaaatatgggtgaaaatagttgcattgaccgctgt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 gagaataggtacaaggagtctgagctaaatatgggtgaaaatagttgcattgaccgctgt 379
Query: 181 gtttcaaaatattggcatgttactaatttaattggtcagctgcttggttctgggaggcct 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 380 gtttcaaaatattggcatgttactaatctaattggtcagctgcttggttctgggaagcct 439
Query: 241 ccaatgtaaacc 252
||||||||||||
Sbjct: 440 ccaatgtaaacc 451
>gnl|LJGI|TC81386 similar to UniRef100_Q9XH47 Cluster: Small zinc finger-like
protein; n=1; Pinus taeda|Rep: Small zinc finger-like
protein - Pinus taeda (Loblolly pine), partial (98%)
Length = 783
Score = 428 bits (216), Expect = e-120
Identities = 243/252 (96%)
Strand = Plus / Plus
Query: 1 atggctgcaccaccttccgcccttgataaagaacagatttttggaatggctgaaaaggag 60
||||||||||| ||||| || |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 267 atggctgcaccgccttcggcgcttgataaagaacagattttcggaatggctgacaaggag 326
Query: 61 atggaatacagggtcgaattgttcaacaagatgacccagacctgtttcaacaagtgtgtt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atggaatacagggttgaattgttcaacaagatgacccagacctgtttcaacaagtgtgtt 386
Query: 121 gagaacaggtacaaggagtctgagctaaatatgggtgaaaatagttgcattgaccgctgt 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 gagaataggtacaaggagtctgagctaaatatgggtgaaaatagttgcattgaccgctgt 446
Query: 181 gtttcaaaatattggcatgttactaatttaattggtcagctgcttggttctgggaggcct 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct: 447 gtttcaaaatattggcatgttactaatctaattggtcagctgcttggttctgggaagcct 506
Query: 241 ccaatgtaaacc 252
||||||||||||
Sbjct: 507 ccaatgtaaacc 518
>gnl|LJGI|BP039616 UniRef100_Q9XH47 Cluster: Small zinc finger-like protein; n=1;
Pinus taeda|Rep: Small zinc finger-like protein - Pinus
taeda (Loblolly pine), partial (12%)
Length = 564
Score = 58.0 bits (29), Expect = 3e-08
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 128 ggtacaaggagtctgagctaaatatgggtgaaa 160
|||||||||||||||||||||||||||| ||||
Sbjct: 509 ggtacaaggagtctgagctaaatatgggggaaa 541