Miyakogusa Predicted Gene
- Lj3g3v1680390.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1680390.1 tr|Q9STE9|Q9STE9_ARATH Serine/threonine
kinase-like protein OS=Arabidopsis thaliana GN=T6H20.220
PE=,28.91,8e-16,coiled-coil,NULL; seg,NULL,gene.g47873.t1.1
(1302 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82405 similar to UniRef100_Q2HS33 Cluster: Eukaryotic... 2518 0.0
>gnl|LJGI|TC82405 similar to UniRef100_Q2HS33 Cluster: Eukaryotic RNA polymerase II
heptapeptide repeat; n=1; Medicago truncatula|Rep:
Eukaryotic RNA polymerase II heptapeptide repeat -
Medicago truncatula (Barrel medic), partial (34%)
Length = 1476
Score = 2518 bits (1270), Expect = 0.0
Identities = 1294/1302 (99%)
Strand = Plus / Plus
Query: 1 atgtctctgtcagaacgcacatacaaacatgttaatacttcaagaagtcccaccaccgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 94 atgtctctgtcagaacgcacatacaaacatgttaatacttcaagaagtcccaccaccgtt 153
Query: 61 aatgtggaacaataccttcgaggaagagggaaatcctctaggatgtcaccaacctattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 154 aatgtggaacaataccttcgaggaagagggaaatcctctaggatgtcaccaacctattct 213
Query: 121 ccgacctcctcttccccctcctccccttactttgagagggtgaagcaccatgaccctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccgacctcctcttccccctcctccccttactttgagagggtgaagcaccatgaccctgaa 273
Query: 181 gatgaccatggcctctatcagaagaaatcagttctcgccaaagtgaaggagaaggcaagg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 gatgaccatggcctctatcagaagaaatcagttctcgccaaagtgaaggagaaggcaagg 333
Query: 241 agattgcgcactagcctcagcggcaagagaagacaggaggacgggaatctcactccttct 300
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 334 agattgcgcactagcctcagcggcaagaggagacaggaggacgggaatctcactccttct 393
Query: 301 tggggtgttagcttagaagacgtggaggaggaagaagaagatgctgaataccttggagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 tggggtgttagcttagaagacgtggaggaggaagaagaagatgctgaataccttggagct 453
Query: 361 ccaatctacgaatcggagctggcacctgaggactacaaagaaaatgcaagacaacatcca 420
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccaatctacgaatcggagctggcgcctgaggactacaaagaaaatgcaagacaacatcca 513
Query: 421 agagcaaatccagtcatctccgagaagcgtgttttgcggaatgctatcaaatcaggaatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 agagcaaatccagtcatctccgagaagcgtgttttgcggaatgctatcaaatcaggaatg 573
Query: 481 gaacaagatcgagacatgctgaatagtcctgctacatcttcaacaacaccacaacctgca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 574 gaacaagatcgagacatgctgaatagtcctgctacatcttcaacaacaccacaacctgca 633
Query: 541 acaactactactcatggtggttcaaacatgacaatgactgaaaaaatagcagagaaattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 acaactactactcatggtggttcaaacatgacaatgactgaaaaaatagcagagaaattg 693
Query: 601 acaccagcttttgctaaagggccagatgtagctcattccacatcctctaatgctgtttcc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 694 acaccagcttttgctaaagggccagatgtagctcattccacatcctctaatgctgtttcc 753
Query: 661 agaactccttctgcgaatttgtcatcccaagcttcttcaggttctccactggcttcatca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agaactccttctgcgaatttgtcatcccaagcttcttcaggttctccactggcttcatca 813
Query: 721 gtttcctcgccaacacaaaattcatcatcctcagttgttctacttggtggaaggaataca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 814 gtttcctcgccaacacaaaattcatcatcctcagttgttctacttggtggaaggaataca 873
Query: 781 ggctctgagggtgagccgatgaaagattatttgatgaataagtttgagtcaaggaactat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874 ggctctgagggtgagccgatgaaagattatttgatgaataagtttgagtcaaggaactat 933
Query: 841 gaagaaactcattctcaggtgacacctgaaacagtaagtcataggagaggttctagtaat 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 934 gaagaaactcattctcaggtgacacctgaaacagtaagtcataggagaggttctagtaat 993
Query: 901 gcaggtgtgatggacaaggttaagggagctgtaaattctcttctccgctatgaggattca 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 994 gcaggtgtgatggacaaggttaagggagctgtaaattctcttctccgctatgaggattca 1053
Query: 961 tcgccaacagactattcatcggcaacacaaaatttaccattctcattacatagtgggaat 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1054 tcgccaacagactattcatcggcaacacaaaatttaccattctcattacatagtgggaat 1113
Query: 1021 aatgcaagcccctctgtcaaaaactatgtggtgaatgagtctgaggcagggaatgatgaa 1080
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1114 aatgcaagcccctctgtcaaaaactatgtggtaaatgagtctgaggcagggaatgatgaa 1173
Query: 1081 aaaactcggtctcaggttacatctgaaacaatgagtcgtaggaaaggttctattattaat 1140
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1174 aaaactcggtctcaggttacatctgaaacaatgagtcgtaggaaaggttctattattaat 1233
Query: 1141 gaaggtgtgatggagaagtttaaagtagctgtgaattctcttgtccggaacgaggaacct 1200
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 1234 gaaggtgtgatggagaagtttaaaggagctgtgaattctcttctccggaacgaggaacct 1293
Query: 1201 tctcaacagtatgcagtcaaaactcctgctcccagctctataaccaacaatcaagaagtt 1260
|| ||||||||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct: 1294 tcacaacagtatgcagtcaaaactcctgctacaagctctataaccaacaatcaagaagtt 1353
Query: 1261 gcccaggaagagaaccgtgggagaattcttcaagcaaattaa 1302
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1354 gcccaggaagagaaccgtgggagaattcttcaagcaaattaa 1395