Miyakogusa Predicted Gene

Lj3g3v1670380.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1670380.1 tr|C1MW30|C1MW30_MICPC Chloroplast envelope
protein translocase family OS=Micromonas pusilla
(strain,24.6,9e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; SORTING AND
ASSEMBLY MACHINERY (SAM50) PROTEIN,NULL,CUFF.42985.1
         (1338 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC60855 similar to UniRef100_Q2HS34 Cluster: Bacterial ...   839   0.0  
gnl|LJGI|AU252179 homologue to UniRef100_A7NYV8 Cluster: Chromos...   242   5e-63

>gnl|LJGI|TC60855 similar to UniRef100_Q2HS34 Cluster: Bacterial surface antigen;
           n=1; Medicago truncatula|Rep: Bacterial surface antigen
           - Medicago truncatula (Barrel medic), partial (20%)
          Length = 723

 Score =  839 bits (423), Expect = 0.0
 Identities = 423/423 (100%)
 Strand = Plus / Plus

                                                                       
Query: 260 acggaaatggaggcttctggtccagactcctcaccccggcggcggccaacgccgacgagc 319
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 acggaaatggaggcttctggtccagactcctcaccccggcggcggccaacgccgacgagc 360

                                                                       
Query: 320 cacagtcccaggagtgggactctcacggcttaccggccaacatcacggttcagttgaaca 379
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cacagtcccaggagtgggactctcacggcttaccggccaacatcacggttcagttgaaca 420

                                                                       
Query: 380 agctgagcggcttcaaaaagtacatgatctcggagatcctcttcttcgatcggaaccgga 439
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agctgagcggcttcaaaaagtacatgatctcggagatcctcttcttcgatcggaaccgga 480

                                                                       
Query: 440 gggccaaggtgagcgccgacgactcgttcagcgagatggtgtccctccgccccggcggcg 499
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gggccaaggtgagcgccgacgactcgttcagcgagatggtgtccctccgccccggcggcg 540

                                                                       
Query: 500 tttacaccaaggcgcagctgcagaaggagctggagtctctcgccacttgcggaatgttcg 559
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 tttacaccaaggcgcagctgcagaaggagctggagtctctcgccacttgcggaatgttcg 600

                                                                       
Query: 560 agaaggtcgatttgcaagggaagaccaacgccgatggaaccctatcgttgacggttgcgt 619
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 agaaggtcgatttgcaagggaagaccaacgccgatggaaccctatcgttgacggttgcgt 660

                                                                       
Query: 620 tcagtgagagtacttgggagtcagctgataggttcaggtgtatcaacgtgggtttgatgc 679
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 tcagtgagagtacttgggagtcagctgataggttcaggtgtatcaacgtgggtttgatgc 720

              
Query: 680 cgc 682
           |||
Sbjct: 721 cgc 723



 Score =  246 bits (124), Expect = 3e-64
 Identities = 124/124 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctttcgctcccaccagccacctcggcaaggtgctatccatccaccgtgacaaaccc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  atgtctttcgctcccaccagccacctcggcaaggtgctatccatccaccgtgacaaaccc 101

                                                                       
Query: 61  tcttccccttccaacaaaaaactctctcgcccttcactcttcaaaaccatctctaccacc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tcttccccttccaacaaaaaactctctcgcccttcactcttcaaaaccatctctaccacc 161

               
Query: 121 gtcg 124
           ||||
Sbjct: 162 gtcg 165


>gnl|LJGI|AU252179 homologue to UniRef100_A7NYV8 Cluster: Chromosome chr6 scaffold_3,
            whole genome shotgun sequence; n=2; Vitis vinifera|Rep:
            Chromosome chr6 scaffold_3, whole genome shotgun sequence
            - Vitis vinifera (Grape), partial (18%)
          Length = 335

 Score =  242 bits (122), Expect = 5e-63
 Identities = 122/122 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1217 gaagacggctgaagtcagtactgaatggagtattgtccctggacgaggagggcgccccac 1276
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 105  gaagacggctgaagtcagtactgaatggagtattgtccctggacgaggagggcgccccac 164

                                                                        
Query: 1277 tttggcctcgcttcagccaggtggaacagtttcttttgaacaccggaatctgcaaggact 1336
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 165  tttggcctcgcttcagccaggtggaacagtttcttttgaacaccggaatctgcaaggact 224

              
Query: 1337 ga 1338
            ||
Sbjct: 225  ga 226



 Score =  157 bits (79), Expect = 2e-37
 Identities = 79/79 (100%)
 Strand = Plus / Plus

                                                                        
Query: 1138 ataaactcccttgcgttgttttcaaatattgaggtgaatccaaggcctgatgagaataat 1197
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    ataaactcccttgcgttgttttcaaatattgaggtgaatccaaggcctgatgagaataat 60

                               
Query: 1198 gaaggagggataattgttg 1216
            |||||||||||||||||||
Sbjct: 61   gaaggagggataattgttg 79