Miyakogusa Predicted Gene
- Lj3g3v1666260.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1666260.1 CUFF.42970.1
(825 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79331 similar to UniRef100_A7PIR9 Cluster: Chromosome... 1628 0.0
gnl|LJGI|TC81154 similar to UniRef100_A7PIR9 Cluster: Chromosome... 90 3e-17
gnl|LJGI|DC594460 similar to UniRef100_Q47U53 Cluster: Sensor pr... 52 6e-06
>gnl|LJGI|TC79331 similar to UniRef100_A7PIR9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (84%)
Length = 1011
Score = 1628 bits (821), Expect = 0.0
Identities = 824/825 (99%)
Strand = Plus / Plus
Query: 1 atgagtttcgttttccgagggagtaggggagatattgaaagcggtttttcagaatatgct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 atgagtttcgttttccgagggagtaggggagatattgaaagcggtttttcagaatatgct 211
Query: 61 cctgagagaaccacaatgcgtgtacatccatctcggccagttaatagcaattcactggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cctgagagaaccacaatgcgtgtacatccatctcggccagttaatagcaattcactggct 271
Query: 121 tttctgattacagttattatgctattcattttattgagttctcctcagatgtcgcattat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tttctgattacagttattatgctattcattttattgagttctcctcagatgtcgcattat 331
Query: 181 cttttgctctggcttgtgatggctatctttgcgatggctacgagcctgaggatgtatgca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 cttttgctctggcttgtgatggctatctttgcgatggctacgagcctgaggatgtatgca 391
Query: 241 gcttgtcaacatcttcaagcgcaagccagggctcatgctgcagcagcctctggattacta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 gcttgtcaacatcttcaagcgcaagccagggctcatgctgcagcagcctctggattacta 451
Query: 301 ggccataatgaattacgacttcatgtgccgccatccatagcaatcgcaactagaggacgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ggccataatgaattacgacttcatgtgccgccatccatagcaatcgcaactagaggacgg 511
Query: 361 ttgcatggacttagacttcagcttgcacttcttgatcgtgaatttgatgagctagattat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 ttgcatggacttagacttcagcttgcacttcttgatcgtgaatttgatgagctagattat 571
Query: 421 gacagcttgagagctctggactctgatactgcttctagtactccatcaatgactgaagaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 gacagcttgagagctctggactctgatactgcttctagtactccatcaatgactgaagaa 631
Query: 481 gagataaattccttgcctgttcacacatataaagttgcagttccaacaaaggatggaacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gagataaattccttgcctgttcacacatataaagttgcagttccaacaaaggatggaacc 691
Query: 541 gcagggttggcatcctcttcaggtgcagctgagattaaacaagactctgaaggagcagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gcagggttggcatcctcttcaggtgcagctgagattaaacaagactctgaaggagcagag 751
Query: 601 ggaagcatcaaagtttcagtagatgaactgacatgtaccatatgcttggaacatgttaag 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 ggaagcatcaaagtttcagtagatgaactgacatgtaccatatgcttggaacatgttaag 811
Query: 661 aggggagagcttgttcgtaacttgccctgcttacatcagtttcatgcgaattgcattgat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 aggggagagcttgttcgtaacttgccctgcttacatcagtttcatgcgaattgcattgat 871
Query: 721 caatggctccgtcaacaaggaacatgtccagtttgtaaatttaggatggggttgggatgg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 caatggctccgtcaacaaggaacatgtccagtttgtaaatttaggatggggttgggatgg 931
Query: 781 cagggaaatggtgatagcgagtccgatggttcagacattgtgtag 825
|||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 932 cagggaaatggtaatagcgagtccgatggttcagacattgtgtag 976
>gnl|LJGI|TC81154 similar to UniRef100_A7PIR9 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (95%)
Length = 1284
Score = 89.7 bits (45), Expect = 3e-17
Identities = 99/117 (84%)
Strand = Plus / Plus
Query: 373 agacttcagcttgcacttcttgatcgtgaatttgatgagctagattatgacagcttgaga 432
|||||||||||||||||||||||||| || |||||||| ||||||||||| | || |||
Sbjct: 621 agacttcagcttgcacttcttgatcgggagtttgatgacctagattatgaaactttaaga 680
Query: 433 gctctggactctgatactgcttctagtactccatcaatgactgaagaagagataaat 489
|||||||| || |||| || ||||| | | || || ||||| || ||||||||||||
Sbjct: 681 gctctggattcagataatgtttctactgcaccttctatgacagaggaagagataaat 737
Score = 73.8 bits (37), Expect = 2e-12
Identities = 76/89 (85%)
Strand = Plus / Plus
Query: 674 ttcgtaacttgccctgcttacatcagtttcatgcgaattgcattgatcaatggctccgtc 733
|||||| |||||| ||||| ||||||||||| || |||||||| |||| |||||| || |
Sbjct: 922 ttcgtagcttgccatgcttgcatcagtttcacgctaattgcatcgatccatggctgcggc 981
Query: 734 aacaaggaacatgtccagtttgtaaattt 762
||||||| ||||| || || |||||||||
Sbjct: 982 aacaagggacatgccctgtctgtaaattt 1010
>gnl|LJGI|DC594460 similar to UniRef100_Q47U53 Cluster: Sensor protein; n=1; Colwellia
psychrerythraea 34H|Rep: Sensor protein - Colwellia,
partial (2%)
Length = 592
Score = 52.0 bits (26), Expect = 6e-06
Identities = 44/50 (88%)
Strand = Plus / Plus
Query: 414 agattatgacagcttgagagctctggactctgatactgcttctagtactc 463
||||||||||| |||||||||||| | |||| ||||||||||| |||||
Sbjct: 367 agattatgacatattgagagctctgcaatctggtactgcttctaatactc 416