Miyakogusa Predicted Gene
- Lj3g3v1664580.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1664580.1 NODE_65315_length_2172_cov_65.331032.path2.1
(2005 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO036959 similar to UniRef100_A3E2G3 Cluster: SCARECROW... 1116 0.0
gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome... 119 7e-26
gnl|LJGI|TC76237 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 119 7e-26
gnl|LJGI|FS322058 similar to UniRef100_A3E2G3 Cluster: SCARECROW... 98 3e-19
gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCA... 94 4e-18
gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-... 82 2e-14
gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705... 78 2e-13
gnl|LJGI|FS353678 weakly similar to UniRef100_A3E2G3 Cluster: SC... 76 9e-13
gnl|LJGI|FS327931 similar to UniRef100_A7PIT3 Cluster: Chromosom... 60 6e-08
gnl|LJGI|FS341673 similar to UniRef100_A7PLW2 Cluster: Chromosom... 54 3e-06
>gnl|LJGI|GO036959 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (13%)
Length = 572
Score = 1116 bits (563), Expect = 0.0
Identities = 570/571 (99%), Gaps = 1/571 (0%)
Strand = Plus / Plus
Query: 618 gaatcatgtgcgtgaagacagggatgatgaagaaagaagaagcaacaagcaatctgcggt 677
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaatcatgtgcgtgaagacagggatgatgaagaaagaagaagcaacaagcaatctgcggt 61
Query: 678 tagttctgatgatggtggtgaaatatctgaaatgtttgaccgggtgttgcttagtattga 737
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tagttctgatgatggtggtgaaatatctgaaatgtttgaccgggtgttgcttagtattga 121
Query: 738 aaatgtaccactgtgtgctgaaccagttgtgcaggagagtagcacagaagtggaggaaca 797
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 aaatgtaccactgtgtgctgaaccagttgtgcaggagagtagcacagaagtggaggaaca 181
Query: 798 agaacaacaaccgcattcgtctgatggattcaagcctcgttccaagagaaatggaaggaa 857
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 agaacaacaaccgcattcgtctgatggattcaagcctcgttccaagagaaatggaaggaa 241
Query: 858 gaaggagacagtggatatgaggacccttttgactctttgtgcacaagctgtgtcctccaa 917
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gaaggagacagtggatatgaggacccttttgactctttgtgcacaagctgtgtcctccaa 301
Query: 918 tgattacaggactgctcatgaacttctgaagcagattaggcagcattcttatgagtttgg 977
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tgattacaggactgctcatgaacttctgaagcagattaggcagcattcttatgagtttgg 361
Query: 978 tgattcatcacagagattggctcattactttgccagtggcctcgaggcacgcttggatgg 1037
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tgattcatcacagagattggctcattactttgccagtggcctcgaggcacgcttggatgg 421
Query: 1038 agatggtactggaaccaaaatattctacatgagcctcaagaagttcactgctgctgatta 1097
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 agatggtactggaaccaaaatattctacatgagcctcaagaagttcactgctgctgatta 481
Query: 1098 cctaaaagcttaccaag-tttttatatctgcttgccctttcaagaaatttgcacatttct 1156
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 cctaaaagcttaccaagttttttatatctgcttgccctttcaagaaatttgcacatttct 541
Query: 1157 tttcaaataagatgattttgaagatagctga 1187
|||||||||||||||||||||||||||||||
Sbjct: 542 tttcaaataagatgattttgaagatagctga 572
>gnl|LJGI|TC82216 similar to UniRef100_A7PNN8 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (25%)
Length = 1057
Score = 119 bits (60), Expect = 7e-26
Identities = 389/496 (78%), Gaps = 2/496 (0%)
Strand = Plus / Plus
Query: 1327 tttcgcccggcagaaagaattgaggaaaccggtcggcgtctagctagctactgtgagcgt 1386
|||||||| || ||| ||||||||| || ||||| ||| | |||| ||| || |||||
Sbjct: 27 tttcgccccacacaaaaaattgaggagactggtcgtcgtttggctaactattgcaagcgt 86
Query: 1387 tttcatgttccctttgagtacaaggcattagcatcacgcaactgggaaaccattcgaatc 1446
|| |||||||||||||||||| || |||||||||| |||||||||||||||||| |
Sbjct: 87 ttcaatgttccctttgagtacactgccatagcatcacggaactgggaaaccattcgagtt 146
Query: 1447 gaagaccttgatattaaaagcaatgaaatacttgctgtgaacactctggtaaggttcaaa 1506
||||||||| ||||| ||| |||| | ||||||| ||| | || | ||||||||
Sbjct: 147 gaagaccttagaattaagagccatgagtttgttgctgtcaactccatgatgaggttcaag 206
Query: 1507 aatctgcacgatgaaacaattgaagtgaacagtcctagaaatgaagttctgagtttaatc 1566
||| ||| ||||| || |||||| |||||||||| ||| ||| |||||| ||| |||
Sbjct: 207 aatttgctggatgagactattgaaatgaacagtcccagagatgctgttctgcttttgatc 266
Query: 1567 aggaagatgaatccggatatttttacgcaaaacatagtaaatggatcttacaatgcccct 1626
|||||||| ||||| ||| ||||| | || ||| | |||||||||| || | |||||
Sbjct: 267 aggaagataaatccagatgtttttgctcactccatcattaatggatctttcagtacccct 326
Query: 1627 ttcttcgccacacgcttcaaggaggcacttttccattattccgcaatgtatgacatgttt 1686
|| || |||||||| || | |||||| | ||||||| ||| || | | ||||||| ||
Sbjct: 327 ttttttgccacacggtttagggaggccttgttccatttttctgctgtttttgacatgctt 386
Query: 1687 gatactctcatatcgcgcacaaatgaatggaggttgatgcttgagagagagtttttaggt 1746
|| ||| ||||||| || ||| |||||||| |||| |||||| ||| || | |||
Sbjct: 387 gacactgtcatatcccgggaaaaccaatggagggtgatagatgagagggaggttgtgggt 446
Query: 1747 cgggagat-tatgaatgttgtggcttgtgaaggttttgagagggttgagaggcctgagac 1805
| | || | ||||||||| | || ||||||||||| |||||| ||||||||||||||||
Sbjct: 447 c-gtagctctatgaatgtgatagcatgtgaaggtttggagaggattgagaggcctgagac 505
Query: 1806 atacaaacaatggcag 1821
||||||||| ||||||
Sbjct: 506 atacaaacagtggcag 521
>gnl|LJGI|TC76237 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (25%)
Length = 754
Score = 119 bits (60), Expect = 7e-26
Identities = 225/280 (80%)
Strand = Plus / Plus
Query: 1130 gccctttcaagaaatttgcacatttcttttcaaataagatgattttgaagatagctgaaa 1189
|||| ||||| || |||||| |||||||| ||||||| |||||| |||| ||||| ||
Sbjct: 453 gcccattcaaaaagtttgcatatttctttgcaaataaaatgattatgaaagaagctgcaa 512
Query: 1190 aggcagaaacccttcacatcattgattttggtattctgtatggtttccagtggccgattc 1249
| |||||| | ||||| ||||||||||||||||| || ||||||||||||||||| ||||
Sbjct: 513 aagcagaatctcttcatatcattgattttggtatcctatatggtttccagtggccaattc 572
Query: 1250 tcatcaagattttgtcaaaaagagagggtggtcctcccaagctaaggataacaggaatag 1309
| || ||| | || ||| ||||||| ||||| |||||||| | | ||| ||||| ||||
Sbjct: 573 ttattaagttcttatcagaaagagatggtggacctcccaaattgaagatcacagggatag 632
Query: 1310 agtatcctcaagccggttttcgcccggcagaaagaattgaggaaaccggtcggcgtctag 1369
||| ||| | |||| ||||| || | ||||||||||| || ||||||| |||||
Sbjct: 633 agttccctttacccggatttcggcccacggaaagaattgatgagaccggtcatcgtctca 692
Query: 1370 ctagctactgtgagcgttttcatgttccctttgagtacaa 1409
| | ||| || ||||||| |||||||||||||||||||
Sbjct: 693 ccaactattgcaagcgtttcaatgttccctttgagtacaa 732
>gnl|LJGI|FS322058 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (14%)
Length = 764
Score = 97.6 bits (49), Expect = 3e-19
Identities = 85/97 (87%)
Strand = Plus / Minus
Query: 936 tgaacttctgaagcagattaggcagcattcttatgagtttggtgattcatcacagagatt 995
||||||||| |||||||| ||||||||||||| | ||||||||| ||||| |||||
Sbjct: 347 tgaacttctaaagcagataaggcagcattcttctccctttggtgatgggtcacaaagatt 288
Query: 996 ggctcattactttgccagtggcctcgaggcacgcttg 1032
||||||||||||||||| |||||| ||||||||||||
Sbjct: 287 ggctcattactttgccaatggccttgaggcacgcttg 251
>gnl|LJGI|TC66921 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1;
n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (27%)
Length = 1180
Score = 93.7 bits (47), Expect = 4e-18
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1771 tgtgaaggttttgagagggttgagaggcctgagacatacaaacaatggcagactaggaa 1829
|||||||||||||||||| ||||||||||||||||||||||||| ||||||| ||||||
Sbjct: 454 tgtgaaggttttgagaggcttgagaggcctgagacatacaaacagtggcagattaggaa 512
Score = 83.8 bits (42), Expect = 4e-15
Identities = 108/130 (83%)
Strand = Plus / Plus
Query: 1340 aaagaattgaggaaaccggtcggcgtctagctagctactgtgagcgttttcatgttccct 1399
||||||||||||| |||||||| ||| | |||| ||| || ||||||| | |||||||
Sbjct: 23 aaagaattgaggagaccggtcgtcgtttggctaactattgcaagcgtttcaaagttccct 82
Query: 1400 ttgagtacaaggcattagcatcacgcaactgggaaaccattcgaatcgaagaccttgata 1459
||||||||| || |||||||||| |||||||||||| ||||| | ||||||||| | |
Sbjct: 83 ttgagtacactgccatagcatcacggaactgggaaacccttcgagttgaagaccttaaaa 142
Query: 1460 ttaaaagcaa 1469
|||| |||||
Sbjct: 143 ttaagagcaa 152
>gnl|LJGI|TC70675 similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1; n=1;
Castanea sativa|Rep: SCARECROW-like protein 1 - Castanea
sativa (Sweet chestnut), partial (14%)
Length = 677
Score = 81.8 bits (41), Expect = 2e-14
Identities = 80/93 (86%)
Strand = Plus / Plus
Query: 1902 atggtaccacaaagattttgtcttcaatgaagatcacaattggatgcttctaggttggaa 1961
||||||||| || || |||||||| ||||||| |||| |||||||||| |||||||||
Sbjct: 221 atggtaccataaggactttgtctttgatgaagacaacaactggatgcttcaaggttggaa 280
Query: 1962 ggggcgcatattgtatgcttccacttgttgggt 1994
|| ||||| ||||||||||||||||||||||
Sbjct: 281 aggccgcattatgtatgcttccacttgttgggt 313
>gnl|LJGI|FS354262 similar to UniRef100_Q0IQV3 Cluster: Os11g0705800 protein; n=1; Oryza
sativa Japonica Group|Rep: Os11g0705800 protein - Oryza
sativa subsp. japonica (Rice), partial (12%)
Length = 724
Score = 77.8 bits (39), Expect = 2e-13
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 1771 tgtgaaggttttgagagggttgagaggcctgagacatacaaacaatggcag 1821
||||||||||| |||||| ||||||||||||||||||||||||| ||||||
Sbjct: 641 tgtgaaggtttggagaggattgagaggcctgagacatacaaacagtggcag 591
>gnl|LJGI|FS353678 weakly similar to UniRef100_A3E2G3 Cluster: SCARECROW-like protein 1;
n=1; Castanea sativa|Rep: SCARECROW-like protein 1 -
Castanea sativa (Sweet chestnut), partial (22%)
Length = 764
Score = 75.8 bits (38), Expect = 9e-13
Identities = 239/306 (78%)
Strand = Plus / Minus
Query: 1516 gatgaaacaattgaagtgaacagtcctagaaatgaagttctgagtttaatcaggaagatg 1575
||||| || |||||| |||||||||||||| ||| |||||| ||| ||||||| |||
Sbjct: 738 gatgagactattgaaatgaacagtcctagagatgctgttctgcatttgatcaggaggata 679
Query: 1576 aatccggatatttttacgcaaaacatagtaaatggatcttacaatgcccctttcttcgcc 1635
||||||||||||||| | || ||| |||||||||||| |||| |||||||||| | |
Sbjct: 678 aatccggatatttttgctcagtccatcataaatggatctttcaattcccctttctttgtc 619
Query: 1636 acacgcttcaaggaggcacttttccattattccgcaatgtatgacatgtttgatactctc 1695
||||| || | ||| || | ||| ||| ||| || || ||||| || ||||||| | ||
Sbjct: 618 acacggtttagggaagccttgttctatttttctgctatttatgatatttttgatagtgtc 559
Query: 1696 atatcgcgcacaaatgaatggaggttgatgcttgagagagagtttttaggtcgggagatt 1755
||| | | ||| |||||||| ||||| ||||||| ||| | | ||||||
Sbjct: 558 ataccccaggaaaaccaatggagggtgatgattgagagggagatggtgggtcggactgcg 499
Query: 1756 atgaatgttgtggcttgtgaaggttttgagagggttgagaggcctgagacatacaaacaa 1815
|||||||| | || ||||||||||| | |||||||||||||||||||||||| |||||
Sbjct: 498 atgaatgtgatagcatgtgaaggtttggcgagggttgagaggcctgagacatataaacag 439
Query: 1816 tggcag 1821
||||||
Sbjct: 438 tggcag 433
>gnl|LJGI|FS327931 similar to UniRef100_A7PIT3 Cluster: Chromosome chr13 scaffold_17,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr13 scaffold_17, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (3%)
Length = 707
Score = 60.0 bits (30), Expect = 6e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 433 cagtttagaagagggttagaggaagctagtaagtttcttcct 474
|||||||| |||||||||||||| |||| |||||||||||||
Sbjct: 602 cagtttaggagagggttagaggaggctactaagtttcttcct 643
>gnl|LJGI|FS341673 similar to UniRef100_A7PLW2 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (12%)
Length = 819
Score = 54.0 bits (27), Expect = 3e-06
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 571 aattcaaattcaaattcaaattcaaat 597
|||||||||||||||||||||||||||
Sbjct: 618 aattcaaattcaaattcaaattcaaat 644