Miyakogusa Predicted Gene

Lj3g3v1631800.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1631800.1 tr|I0Z597|I0Z597_9CHLO Mitochondrial import inner
membrane translocase subunit Tim9 OS=Coccomyxa
sub,44.94,3e-17,MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE
SUBUNIT TIM9,NULL; zf-Tim10_DDP,Mitochondrial inner
,NODE_75838_length_678_cov_10.312684.path2.1
         (294 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS343947 weakly similar to UniRef100_A7NZ03 Cluster: Ch...   583   e-166
gnl|LJGI|TC71121 similar to UniRef100_Q9XGX7 Cluster: Mitochondr...    76   1e-13

>gnl|LJGI|FS343947 weakly similar to UniRef100_A7NZ03 Cluster: Chromosome chr6
           scaffold_3, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr6 scaffold_3, whole genome
           shotgun sequence - Vitis vinifera (Grape), complete
          Length = 621

 Score =  583 bits (294), Expect = e-166
 Identities = 294/294 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggacaagaaagttattgcagacttggataatcttcctgaagaagataaacaaagaatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 atggacaagaaagttattgcagacttggataatcttcctgaagaagataaacaaagaatg 212

                                                                       
Query: 61  tccaccatggtagaccagctccaaacccgagacagtctaaggatgtataattcaatagtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 tccaccatggtagaccagctccaaacccgagacagtctaaggatgtataattcaatagtg 272

                                                                       
Query: 121 gagagatgcttcaagaattgtgtcaatacgttctatcgaaaatccctgaccaagcacgag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 gagagatgcttcaagaattgtgtcaatacgttctatcgaaaatccctgaccaagcacgag 332

                                                                       
Query: 181 gaaacatgtgttcttagatgtgctgaaaaattcgtgaggctttcaactcaagttggtttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 333 gaaacatgtgttcttagatgtgctgaaaaattcgtgaggctttcaactcaagttggtttg 392

                                                                 
Query: 241 agattctcagatctcaacctaggagcatctacaaaagataatggcttatagctg 294
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 393 agattctcagatctcaacctaggagcatctacaaaagataatggcttatagctg 446


>gnl|LJGI|TC71121 similar to UniRef100_Q9XGX7 Cluster: Mitochondrial import inner
           membrane translocase subunit Tim9; n=3; Oryza
           sativa|Rep: Mitochondrial import inner membrane
           translocase subunit Tim9 - Oryza sativa subsp. japonica
           (Rice), complete
          Length = 527

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 74/86 (86%)
 Strand = Plus / Plus

                                                                       
Query: 46  gataaacaaagaatgtccaccatggtagaccagctccaaacccgagacagtctaaggatg 105
           ||||| ||||||||||| |||||| | || |||||||||| ||| |||||||| || |||
Sbjct: 116 gataagcaaagaatgtctaccatgatcgatcagctccaaatccgtgacagtctgagaatg 175

                                     
Query: 106 tataattcaatagtggagagatgctt 131
           ||||||||  | ||||||||||||||
Sbjct: 176 tataattccctggtggagagatgctt 201