Miyakogusa Predicted Gene
- Lj3g3v1606140.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj3g3v1606140.1 Non Chatacterized Hit- tr|K4CA30|K4CA30_SOLLC
Uncharacterized protein OS=Solanum lycopersicum
GN=Sol,34.54,1e-16,DUF740,Uncharacterised protein family UPF0503;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL; seg,,CUFF.42865.1
(1735 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC68589 similar to UniRef100_A7PP09 Cluster: Chromosome... 1162 0.0
gnl|LJGI|TC63168 similar to UniRef100_A7PP09 Cluster: Chromosome... 950 0.0
>gnl|LJGI|TC68589 similar to UniRef100_A7PP09 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (6%)
Length = 1288
Score = 1162 bits (586), Expect = 0.0
Identities = 610/617 (98%), Gaps = 2/617 (0%)
Strand = Plus / Plus
Query: 1119 gttgatcaggtctgtttcaaatggcagcattattggcaatgccaaggttgctgctgctgg 1178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 gttgatcaggtctgtttcaaatggcagcattattggcaatgccaaggttgctgctgct-- 58
Query: 1179 tgttgctgctggtgttgatttcatccatggcgcgaaaatggggtttcaggatcgagggga 1238
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 59 tgttgctgctggtgttgatttcatccatggcgcgaaaatggggttttaggatcgagggga 118
Query: 1239 tgattgctgttctgaagtgtatgggaatggtgaaaggaaagaggagaagaagtcacggag 1298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 119 tgattgctgttctgaagtgtatgggaatggtgaaaggaaagaggagaagaagtcacggag 178
Query: 1299 gtggagcatttggggattgattcaccggcgcggtaggaacaaggatgaggatgatggtaa 1358
||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 179 gtggagcatttgggggttgattcaccggcgcggtaggaacaaggacgaggatgatggtaa 238
Query: 1359 gtgtagtagggtgaatggggttgagcgctgcttctcagaggatcatttgaggggtggtgg 1418
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 gtgtaatagggtgaatggggttgagcgctgcttctcagaggatcatttgaggggtggtgg 298
Query: 1419 tttgggtggcagggtgtggaggagcaatagttctgtgagttggagaaatactcaagcttt 1478
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 tttggatggcagggtgtggaggagcaatagttctgtgagttggagaaatactcaagcttt 358
Query: 1479 tactggatcattaggcactcagagtcagaggaggaacattaatggtgttcagggtaatgg 1538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 tactggatcattaggcactcagagtcagaggaggaacattaatggtgttcagggtaatgg 418
Query: 1539 gaatgggaagaaaggtaaagatgagtttgtgctggaaaggaacagaagtgcaaggtactc 1598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gaatgggaagaaaggtaaagatgagtttgtgctggaaaggaacagaagtgcaaggtactc 478
Query: 1599 tcctagcagcgttgacaatggcctattacggttctacttggctcccatgggaggtggtgg 1658
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 tcctagcagcgttgacaatggcctattacggttctacttggctcccatgggaggtggtgg 538
Query: 1659 ccggagaaatgggtctgtgaatggcaggtccaaccaggcacagtctattgcaagaagcgt 1718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ccggagaaatgggtctgtgaatggcaggtccaaccaggcacagtctattgcaagaagcgt 598
Query: 1719 gattggattgtattagc 1735
|||||||||||||||||
Sbjct: 599 gattggattgtattagc 615
>gnl|LJGI|TC63168 similar to UniRef100_A7PP09 Cluster: Chromosome chr8 scaffold_23,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr8 scaffold_23, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 754
Score = 950 bits (479), Expect = 0.0
Identities = 479/479 (100%)
Strand = Plus / Plus
Query: 186 tgccgctgccgctcttagatccgttttccggcaatcctcctcctccttcttccctgagct 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 tgccgctgccgctcttagatccgttttccggcaatcctcctcctccttcttccctgagct 335
Query: 246 ccgccgctcgaaatccttttccgcttccaaggccaacgaagctctctccggagcctttga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 ccgccgctcgaaatccttttccgcttccaaggccaacgaagctctctccggagcctttga 395
Query: 306 gccccagagaaaatcctgcgacgtcagggttcgtggcgcaaactttaacctcttcaacca 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gccccagagaaaatcctgcgacgtcagggttcgtggcgcaaactttaacctcttcaacca 455
Query: 366 agacaacagcaacaacgagaagaagattgaagccgttgattgcagaaatcaagcttcctc 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 agacaacagcaacaacgagaagaagattgaagccgttgattgcagaaatcaagcttcctc 515
Query: 426 ttcttccaacattcaggtaccaaaggaagaagaagaagagaacaacgaggacgtgataat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ttcttccaacattcaggtaccaaaggaagaagaagaagagaacaacgaggacgtgataat 575
Query: 486 cgttgtggaggaggaacctgaacccaatgtgtgcagtgtgagcgaggagattgaaattgc 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 cgttgtggaggaggaacctgaacccaatgtgtgcagtgtgagcgaggagattgaaattgc 635
Query: 546 tgaagaagaaggagaggaattgaagacgatgaaggaccacatagatctggattcttcaca 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 tgaagaagaaggagaggaattgaagacgatgaaggaccacatagatctggattcttcaca 695
Query: 606 aacgaagaaacccaagggaagcttctggtctgcggcttcggttttcagcaagaagcttc 664
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 aacgaagaaacccaagggaagcttctggtctgcggcttcggttttcagcaagaagcttc 754
Score = 95.6 bits (48), Expect = 9e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 70 gacggacaattcaccggcttctgcccctcatgcctctgcgaacgcctcactg 121
|||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 gacgaacaattcaccggcttctgcccctcatgcctctgcgaacgcctcactg 211