Miyakogusa Predicted Gene

Lj3g3v1605080.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj3g3v1605080.1 Non Chatacterized Hit- tr|E9B1F9|E9B1F9_LEIMU
Putative FG-GAP repeat protein (Putative intergrin
alp,31.28,4e-19,seg,NULL,CUFF.42866.1
         (600 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC73378 similar to UniRef100_Q9FV29 Cluster: Defective ...  1189   0.0  

>gnl|LJGI|TC73378 similar to UniRef100_Q9FV29 Cluster: Defective in exine formation;
           n=1; Arabidopsis thaliana|Rep: Defective in exine
           formation - Arabidopsis thaliana (Mouse-ear cress),
           partial (23%)
          Length = 1087

 Score = 1189 bits (600), Expect = 0.0
 Identities = 600/600 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggtcatggcagacaatgtagatggtggggatgatcttgatctaattgtctcaactatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14  atggtcatggcagacaatgtagatggtggggatgatcttgatctaattgtctcaactatg 73

                                                                       
Query: 61  aatggcaatgtcttctgcttctcaactccctctcctcaccatcccctcaagacatggaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74  aatggcaatgtcttctgcttctcaactccctctcctcaccatcccctcaagacatggaaa 133

                                                                       
Query: 121 atgccaacgcaaggaagaaataatgttgcaaatcggtacaatcgtgaaggtatctatatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 atgccaacgcaaggaagaaataatgttgcaaatcggtacaatcgtgaaggtatctatatt 193

                                                                       
Query: 181 actcatccctctagggcattccgtgatgaggaaggcaagagcttttgggtagaaatagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 actcatccctctagggcattccgtgatgaggaaggcaagagcttttgggtagaaatagag 253

                                                                       
Query: 241 attgtagacaattaccgatacccatctgggcatcaagggccataccatgtcactataacc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 attgtagacaattaccgatacccatctgggcatcaagggccataccatgtcactataacc 313

                                                                       
Query: 301 ttgctagtacctggtaactaccaaggagagagaacaataaagcagaatcagacctattat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 ttgctagtacctggtaactaccaaggagagagaacaataaagcagaatcagacctattat 373

                                                                       
Query: 361 caacctggtaaacatcgaatcaagctgccaactgtgggagtaaggaccagtggaacggtt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 caacctggtaaacatcgaatcaagctgccaactgtgggagtaaggaccagtggaacggtt 433

                                                                       
Query: 421 ttggttgagatggttgacaagaatggattgtatttctatgatgacttttccctcacattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ttggttgagatggttgacaagaatggattgtatttctatgatgacttttccctcacattt 493

                                                                       
Query: 481 catatgcactactacaaactcttgaagtggcttcttgttcttccaatgcttgggatgttt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 catatgcactactacaaactcttgaagtggcttcttgttcttccaatgcttgggatgttt 553

                                                                       
Query: 541 ggcatgcttgtcatccttcgcccacaagagtcaatgccattgccatcattttcaaggaac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ggcatgcttgtcatccttcgcccacaagagtcaatgccattgccatcattttcaaggaac 613